Demequina sp. TMPB413: LGT36_003380
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Entry
LGT36_003380 CDS
T08088
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
dem
Demequina sp. TMPB413
Pathway
dem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LGT36_003380 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_003380 (recO)
DNA repair and recombination proteins [BR:
dem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LGT36_003380 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LGT36_003380 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DZR_2
Motif
Other DBs
NCBI-ProteinID:
UPU88976
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Position
706366..707112
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AA seq
248 aa
AA seq
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MPLYRDHAIVLRTHKLGEADRIVTMLTRSHGKVRAVAKGVRRTTSRIGSRMEPFMLADVQ
LYEGRNLDIVSQVETLEPYARRICEDYGLFTAATAMVETVDSLVDLEKEPARDHFMLLHG
GLGALSRREHDAGLVLDSFLLRSLALAGYAPSFDECATCGAPGPHRAFAVAGGGATCENC
RQPGSAAPAPEVFSLLAALIDGRWREADSSEGRHRREAAGLVAAYAQFHMERRVRSLTHV
DRSDQGGR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctctaccgcgaccacgccatcgtcctcaggacgcacaagctgggcgaggccgac
cgcatcgtgacgatgctgacgcgcagtcacggcaaggtgagagccgtcgcgaaaggggtg
cgccgcaccacaagcaggatcggctcgcgcatggagcccttcatgctcgctgatgttcag
ttgtatgagggccgcaacctcgacatcgtgagtcaggtggagacgctcgagccgtacgcg
cggcgcatctgcgaggactacggcctcttcacggccgcaacggccatggtggagacggtc
gactcgctcgttgacctcgagaaggagcctgcgcgagaccacttcatgttgttgcacggg
gggcttggtgcgctgagccgccgcgaacacgatgctggtctggtgcttgactcgttcttg
ttgcgctctctcgcgttggctggctatgcgccaagttttgatgagtgcgcgacgtgcggc
gcgccagggccgcaccgtgcgttcgcggtggccggcggtggggcgacgtgcgagaactgt
cgccagccgggttccgcggcacccgccccggaggtgttctcactgctcgccgcgctgatc
gacgggcgttggcgcgaggcggattcctctgaggggaggcatcggcgcgaggccgccggg
cttgtcgccgcctacgcccagttccacatggagcggcgggtgcgctcactcacccacgtg
gatcgctctgatcagggcggtcgatag
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