Demequina sp. TMPB413: LGT36_004865
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Entry
LGT36_004865 CDS
T08088
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LGT36_004865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_004865
Enzymes [BR:
dem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGT36_004865
DNA repair and recombination proteins [BR:
dem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LGT36_004865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
UPU89261
LinkDB
All DBs
Position
1002197..1004098
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AA seq
633 aa
AA seq
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MFARVVVDSPLPHLDRPFDYSVPEALAGVVRVGSRVRVPFAGRLSSAVVVDLSDEASPHA
LKPIKSAGAVASFSQEALNLARQIAARYGGSLWDVLRLMAPARVASVEKLDWEAMEAAHV
PADLVVASSEHARAAGLPTAPGSRTVWAASPASSFPMPVEPILAWALAAIADHGSAIIVV
PDARAAHALAAHAQSLGLRRWTARSGGHFALMDADDGPSLRFGSYLAAMRGVARLVIGTR
SSAWQPVPTLRALCIWDEGSTTFFEPRAPYPHSRTVAAMRAQQTEASLMIAGYAVSPDAV
ALVENGFASRGGTASLRESLPRVDVIGPERREREGGQGKHWMPASVWTPLIAAARDRVAA
ILVPQSGYASGLRCSRCSTPAECPECGGDLQRASAQDAPQCRECEREAPQWHCPECRGYR
LTPAGLGVERLAAQVTRMAAGVPVTVSSSGTGVAGDGSVASGVVVATPAALPAVAGGYEH
LAIVGARVNVGEGLGAEYATLRRWMNAAALVAPRADGGVVSVVGDIPEALRLALVAWDGW
DAGAGDLAQRKQLGLPPHRRAMRLDGPRDAIEAFARAVEEGPFDLSRDAEGAWVLATRAA
MPALVAVARSLAVERSAASAQPLFIRVDAVPGA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgcgcgggtcgtcgtcgatagcccgctgccgcacctcgacaggcctttcgactac
tccgtccctgaagcactcgcaggcgtggtgcgcgtgggcagcagggtgcgtgtccctttc
gcaggcaggctcagttcggccgtggtggtggacctctccgacgaggcgtcacctcacgcg
ttgaaacccatcaaatccgctggcgccgtcgcttccttcagccaagaggctctgaatctc
gcacgccagatcgcggcacgctacggcggatcactgtgggacgtgttgcgcctgatggcg
cccgctcgagttgcctccgtggagaagttggactgggaagcgatggaagcggcgcatgta
ccagccgacctcgtggttgcgtcatccgagcacgcgcgcgccgccggactgccgaccgcc
cctggcagccggaccgtgtgggcagcatcgccagcgtcgtcgttccccatgccggtcgaa
ccgatacttgcatgggcgttggcggccatcgccgatcatggctctgccatcatcgttgtg
ccggacgcgcgggccgcgcacgctcttgccgcacatgcccaaagccttggattgcgccgc
tggacggcccggtcaggtgggcacttcgcactcatggatgcagacgacggtccctccctc
aggttcggctcgtacctggcggcgatgcggggagtggcgaggctcgtgatcgggaccaga
tcgtcggcatggcaacccgtaccgactctgcgcgccttgtgtatctgggatgaaggctcc
acgacattcttcgagccacgcgctccctacccgcactccagaaccgtcgcggccatgcgg
gctcaacagacggaagcgtcgctgatgatcgctgggtatgcggtgtcgcctgacgccgtg
gcgctggtcgagaatggcttcgcctcgcgtggagggaccgcgtctcttcgcgagtccttg
ccccgtgtcgacgtgatcgggcccgagcggcgggaacgcgaaggtggccagggcaagcat
tggatgcccgcctcggtctggacccccttgattgctgcggcgcgcgatcgagtggcggcc
atcctggtgccacagtccggctatgcgagcggactcaggtgctcgcgctgttccacgccc
gccgagtgtcccgagtgcggaggcgaccttcagcgcgcatcagctcaggatgcgccccaa
tgccgagagtgcgaacgcgaggcgccgcaatggcattgccctgaatgcagaggttatcga
ctcacgccggcgggtcttggcgtggagagacttgccgctcaagtgacgcgtatggcggcg
ggagtgcctgtgaccgtctcctcgtccggtacgggggtcgctggcgacggttccgtggcg
tcaggcgtggtcgtcgccaccccggctgcgttgccagcggtggctggcgggtatgagcat
ttggcaattgtcggcgcgcgcgtcaacgtgggtgagggcctgggtgccgagtacgcgacg
ctaaggcggtggatgaacgccgcagctctcgtggcaccgcgcgctgacggcggggtggtg
agcgtcgtgggtgacatccccgaagcgctgcggctcgcactcgtggcgtgggacgggtgg
gacgcgggagcaggagaccttgctcaacgcaagcaactgggccttcctcctcatcgtcgt
gccatgcgcctcgacgggcctcgcgatgcgatcgaggcgtttgcgcgagcggtcgaggag
gggccgttcgacctctccagggacgcggaaggcgcgtgggtgttggccacaagggccgcc
atgccggctcttgtcgccgttgctcgctcgcttgcggtcgaacgctcggccgcctccgcc
cagccactgttcatcagggtcgacgcggttccaggggcatag
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