KEGG   Demequina sp. TMPB413: LGT36_004865
Entry
LGT36_004865      CDS       T08088                                 
Name
(GenBank) hypothetical protein
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
dem  Demequina sp. TMPB413
Pathway
dem03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LGT36_004865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dem03400]
    LGT36_004865
Enzymes [BR:dem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LGT36_004865
DNA repair and recombination proteins [BR:dem03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LGT36_004865
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: UPU89261
LinkDB
Position
1002197..1004098
AA seq 633 aa
MFARVVVDSPLPHLDRPFDYSVPEALAGVVRVGSRVRVPFAGRLSSAVVVDLSDEASPHA
LKPIKSAGAVASFSQEALNLARQIAARYGGSLWDVLRLMAPARVASVEKLDWEAMEAAHV
PADLVVASSEHARAAGLPTAPGSRTVWAASPASSFPMPVEPILAWALAAIADHGSAIIVV
PDARAAHALAAHAQSLGLRRWTARSGGHFALMDADDGPSLRFGSYLAAMRGVARLVIGTR
SSAWQPVPTLRALCIWDEGSTTFFEPRAPYPHSRTVAAMRAQQTEASLMIAGYAVSPDAV
ALVENGFASRGGTASLRESLPRVDVIGPERREREGGQGKHWMPASVWTPLIAAARDRVAA
ILVPQSGYASGLRCSRCSTPAECPECGGDLQRASAQDAPQCRECEREAPQWHCPECRGYR
LTPAGLGVERLAAQVTRMAAGVPVTVSSSGTGVAGDGSVASGVVVATPAALPAVAGGYEH
LAIVGARVNVGEGLGAEYATLRRWMNAAALVAPRADGGVVSVVGDIPEALRLALVAWDGW
DAGAGDLAQRKQLGLPPHRRAMRLDGPRDAIEAFARAVEEGPFDLSRDAEGAWVLATRAA
MPALVAVARSLAVERSAASAQPLFIRVDAVPGA
NT seq 1902 nt   +upstreamnt  +downstreamnt
gtgttcgcgcgggtcgtcgtcgatagcccgctgccgcacctcgacaggcctttcgactac
tccgtccctgaagcactcgcaggcgtggtgcgcgtgggcagcagggtgcgtgtccctttc
gcaggcaggctcagttcggccgtggtggtggacctctccgacgaggcgtcacctcacgcg
ttgaaacccatcaaatccgctggcgccgtcgcttccttcagccaagaggctctgaatctc
gcacgccagatcgcggcacgctacggcggatcactgtgggacgtgttgcgcctgatggcg
cccgctcgagttgcctccgtggagaagttggactgggaagcgatggaagcggcgcatgta
ccagccgacctcgtggttgcgtcatccgagcacgcgcgcgccgccggactgccgaccgcc
cctggcagccggaccgtgtgggcagcatcgccagcgtcgtcgttccccatgccggtcgaa
ccgatacttgcatgggcgttggcggccatcgccgatcatggctctgccatcatcgttgtg
ccggacgcgcgggccgcgcacgctcttgccgcacatgcccaaagccttggattgcgccgc
tggacggcccggtcaggtgggcacttcgcactcatggatgcagacgacggtccctccctc
aggttcggctcgtacctggcggcgatgcggggagtggcgaggctcgtgatcgggaccaga
tcgtcggcatggcaacccgtaccgactctgcgcgccttgtgtatctgggatgaaggctcc
acgacattcttcgagccacgcgctccctacccgcactccagaaccgtcgcggccatgcgg
gctcaacagacggaagcgtcgctgatgatcgctgggtatgcggtgtcgcctgacgccgtg
gcgctggtcgagaatggcttcgcctcgcgtggagggaccgcgtctcttcgcgagtccttg
ccccgtgtcgacgtgatcgggcccgagcggcgggaacgcgaaggtggccagggcaagcat
tggatgcccgcctcggtctggacccccttgattgctgcggcgcgcgatcgagtggcggcc
atcctggtgccacagtccggctatgcgagcggactcaggtgctcgcgctgttccacgccc
gccgagtgtcccgagtgcggaggcgaccttcagcgcgcatcagctcaggatgcgccccaa
tgccgagagtgcgaacgcgaggcgccgcaatggcattgccctgaatgcagaggttatcga
ctcacgccggcgggtcttggcgtggagagacttgccgctcaagtgacgcgtatggcggcg
ggagtgcctgtgaccgtctcctcgtccggtacgggggtcgctggcgacggttccgtggcg
tcaggcgtggtcgtcgccaccccggctgcgttgccagcggtggctggcgggtatgagcat
ttggcaattgtcggcgcgcgcgtcaacgtgggtgagggcctgggtgccgagtacgcgacg
ctaaggcggtggatgaacgccgcagctctcgtggcaccgcgcgctgacggcggggtggtg
agcgtcgtgggtgacatccccgaagcgctgcggctcgcactcgtggcgtgggacgggtgg
gacgcgggagcaggagaccttgctcaacgcaagcaactgggccttcctcctcatcgtcgt
gccatgcgcctcgacgggcctcgcgatgcgatcgaggcgtttgcgcgagcggtcgaggag
gggccgttcgacctctccagggacgcggaaggcgcgtgggtgttggccacaagggccgcc
atgccggctcttgtcgccgttgctcgctcgcttgcggtcgaacgctcggccgcctccgcc
cagccactgttcatcagggtcgacgcggttccaggggcatag

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