Demequina sp. TMPB413: LGT36_005345
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Entry
LGT36_005345 CDS
T08088
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
dem
Demequina sp. TMPB413
Pathway
dem03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LGT36_005345 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dem03011
]
LGT36_005345 (rpsA)
Ribosome [BR:
dem03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LGT36_005345 (rpsA)
Bacteria
LGT36_005345 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
DUF4407
Motif
Other DBs
NCBI-ProteinID:
UPU89354
LinkDB
All DBs
Position
complement(1107613..1109106)
Genome browser
AA seq
497 aa
AA seq
DB search
MSVSTPETTQIAVNDIGSSEDFLAAVDATIKNFDDGDLVEGVIVKVDRDEVLLDIGYKTE
GVIPARELSIRHDADPDDVVNVGDTVEALVLTKEDKEGRLILSKKRAQYERAWGSIEKIK
EEDGVVTGSVIEVVKGGLIVDIGLRGFLPASLVEMRRVRDLGPYIGQQIEAKIIELDKNR
NNVVLSRRAFLEQTQSEVRSSFLTALASGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL
SWKHIDHPNEVVSVGQEVEVEVLDIDMDRERVSLSLKATQEDPWAVYARTHAIGQIVPGK
VTKLVPFGAFVRVYDGIEGLVHISELAVRHVELPEQVVQAEEEVFVKIIDIDLERRRISL
SIKQANEGVDPAGEDFDPALYGMTAEYDEAGNYKYPEGFDAETQEWQEGFDAQREAWEAE
YAKAHERWEAHKAFVAKQDAQAAEAEVTEAAAPRKRARGDESGGATSYSSHDEDSSDAGT
LASDERLAALREKLTGN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtatccacccccgagaccacccagatcgccgtcaatgacatcggctcgagcgaa
gacttcctcgccgctgtagacgcgactatcaaaaacttcgacgacggcgaccttgttgaa
ggcgtcatcgtcaaggtcgaccgtgacgaggttctcctcgacatcggttacaagaccgaa
ggcgtgattcccgcccgcgagctgtccattcgtcacgatgctgaccccgacgacgtcgtc
aacgtgggcgacaccgtcgaggccctcgtcctcaccaaggaggacaaagaaggccgcctg
atcctgtcgaagaagcgcgctcagtacgagcgggcttggggttcgatcgagaagatcaag
gaagaggacggcgtcgtcaccggctcggtcatcgaggtcgtcaagggtggccttatcgtc
gacatcggcttgcgtggattcttgcctgcgtcgctcgtggaaatgcgtcgcgtgcgcgat
cttggaccgtacatcggccagcagatcgaagcgaagatcatcgagctcgacaagaaccgc
aacaacgtggtgctgtctcgccgtgccttccttgagcagacgcagtccgaggttcgctcg
tccttcctcacggctctcgcctccggccaggtccgcaagggtgtcgtttcctccatcgtc
aactttggtgcgttcgtcgaccttggcggcgttgatggcctcgtgcacgtctccgagttg
tcgtggaagcacatcgaccacccgaacgaggtcgtgtccgtcggtcaagaggtcgaggtc
gaggttctcgacatcgacatggaccgcgagcgtgtctcgctgtcgctcaaggcgactcag
gaagacccgtgggccgtttacgcccgcacgcacgccatcggtcagatcgtgccaggcaag
gtcaccaagctcgttccgttcggcgcctttgtccgcgtctacgacggcatcgagggcctc
gtgcacatctccgagctggccgtccgtcacgtcgaactgccggagcaggttgtccaggcc
gaagaagaggtgttcgtcaagatcattgacatcgacctcgagcgtcgccgcatctcgctg
tcgatcaagcaggccaacgagggtgtcgaccctgcgggtgaggacttcgaccccgcgctg
tacggcatgacggccgagtacgacgaggctggcaactacaagtacccagagggcttcgac
gccgagacgcaggagtggcaagagggcttcgacgctcagcgcgaggcctgggaggccgag
tacgccaaggcgcacgagcgttgggaagcccacaaggcatttgtggccaagcaggacgct
caggccgccgaggccgaggtcacggaggccgctgctcctcgaaagcgcgcacggggcgac
gagagcggcggagcgacgtcgtactcttcgcacgacgaggactcctcggacgctggcaca
ctcgcgtctgacgagcgccttgccgcgcttcgcgagaagctcacgggcaactag
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