Demequina sp. TMPB413: LGT36_005520
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Entry
LGT36_005520 CDS
T08088
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
dem03051
]
LGT36_005520 (pafA)
Enzymes [BR:
dem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LGT36_005520 (pafA)
Proteasome [BR:
dem03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LGT36_005520 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UPU89386
LinkDB
All DBs
Position
complement(1147272..1148678)
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AA seq
468 aa
AA seq
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MMLGEVPPAQEVDSARRIMGLETEFGLHFDAPQSRSVTPEEVAGHLFHSVVEWGRSSNVF
LTNGSRLYIDVGAHPEYATAECDSLRDIVAYDKAGERIVHDLVAKGESRLAAAGLEGSIY
LYKNNTDSAGNSYGCHENYLVRRRADFKAFASVLLPFFVSRQIVTGSGCITRTPQGAHYS
FSPRADHMWEGMSSATTRSRPMINTRDEPHAHADLYRRMHVIVGDSTMAEPTTRLKMGST
DLLLRILEARLALPELALANEMQAIRTIAHDVTGAATVELADGRHMTGADLQEACLVAVR
ERLDDVIERTEETEQVLDLWERGIAAVRSRDTSGVETELEWAVKFRLLERYRERLGCALD
DPRLARLEMAFHDVSPTRGLFNRLQADGLVSRIVDEADIVHATTQPPATTRAALRGRFVR
EALAAGSDYTVDWVHLKLSGPEPRTVLLKDPFRNLDERVDVLLASLNG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgggtgaggtgccgccggcccaagaggtcgactcggcacgcagaatcatgggg
cttgagaccgagtttggcctgcattttgatgcaccgcagtcgcgttcggtgacgccagaa
gaggtggcagggcacctgtttcactcggtggtcgagtggggcaggtcgtccaacgtgttt
ctcacgaacggttcgcggctctacatcgatgtgggagcccatcccgagtacgcgacggcc
gagtgcgactcgctgcgcgacatcgtggcttacgacaaggcgggggagcggatcgtccac
gatctggtggcaaagggcgagtccaggctcgctgcggcaggtctcgagggctcgatctat
ctctacaagaacaacaccgactcggcaggcaacagctacggctgccacgagaactacttg
gtcagaaggcgcgcggatttcaaggccttcgcctctgtgctcttgcccttctttgtgtca
cggcagatcgtgacgggctccggctgtatcaccaggacgccgcaaggagcccactacagc
ttctctcccagggcggatcacatgtgggagggcatgagttctgcgacgacgcgctcccgc
cccatgatcaacactcgcgacgagccgcatgcccacgccgacttgtaccggcgcatgcat
gtgatcgtgggcgactccaccatggctgagccgacgacgcgcctcaagatgggatcgacc
gacctgctcttgcgcatcctcgaggcgcggctcgccttgccggaactcgcgctggcgaac
gagatgcaggcgattcgcacgatcgcccacgatgtcactggcgccgcaaccgtcgagctt
gccgacggtcgccacatgacgggggccgacctccaagaggcgtgcctggtcgccgtgagg
gagcggctcgacgatgtgattgaacgcacggaagagaccgagcaggtgcttgatctgtgg
gagcggggaatcgcagcggtgcgctcgcgggacacgtcaggagtcgagaccgaactggaa
tgggcggtgaagttcaggttgctcgagcggtatcgggagcggcttggctgcgcgctcgac
gatccccgcctcgcccggctcgagatggcttttcacgacgtgtcacctacgcgcgggctc
tttaatcgtcttcaggccgatggcctggtgtcgcgaatcgtagacgaggcagacatcgtg
cacgccacgacgcagccgcccgccaccaccagggcagcgctgcgcgggcgctttgtgcgg
gaggcgctggccgcgggcagcgattacaccgtcgactgggtccacctcaagttgtcagga
cctgaaccgcgaacagtgctgctgaaggaccctttcaggaacctcgacgaacgcgtcgac
gttcttttggcgtcgttgaacggataa
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