Demequina sp. TMPB413: LGT36_006465
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Entry
LGT36_006465 CDS
T08088
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem00470
D-Amino acid metabolism
dem00550
Peptidoglycan biosynthesis
dem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LGT36_006465 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LGT36_006465 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dem01011
]
LGT36_006465 (murD)
Enzymes [BR:
dem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LGT36_006465 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dem01011
]
Precursor biosynthesis
Amino acid ligase
LGT36_006465 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
UPU89567
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Position
complement(1332768..1334174)
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AA seq
468 aa
AA seq
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MAAPDVPQAPDGGAHLAGATVLVLGMGVAGRSATAALKDLGAVCVSVDANGAADHESVEG
LDLGAFDVVVASAAFSPSSDAISACLAAGLEVWSEMEFAWRVRSNDAPWVLVTGTNGKTT
TTQMVAAMAAAAGVDVKACGNMGVSVIDAAREGHALLAVEIASLQLHFTHTVSPAAAVCL
NADTDHLDWHGSVEAYRADKARVYRGVRVAAVYPAHDRMVEAMVEDADVVEGCRAIGVTA
GSPAVSQLGVVDGYLVDRAFTPQRRTEALELGHVDDLAHLVAGDVPTYVVTNALSAAALA
RAVDVPREAIRDGLRGFALDSHRTAFVATIDTVAYVDDSKATNAHAALAAFGGKKLSSVV
WIAGGLAKGQDFDALVGQVRDRLRAVVLIGVDPEPLATALAEHAADIPVKRIGPGDTVMR
DAVAAARGFAQQGDTVLLSPACASMDQFRSYADRGEAFTEEVRALQGG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccgacgtaccgcaggcgcctgacggcggcgctcacctggcaggcgccacc
gtgcttgtgctgggcatgggagtggcgggccgctccgcaactgcggcgttgaaggatttg
ggcgcggtgtgcgtaagcgtcgacgcgaacggcgccgccgaccacgagagtgttgagggc
ctcgacctgggagcctttgacgtggtggtcgcttccgcagccttctcgccgagttcggat
gcgatcagcgcatgtctcgccgctggcctcgaggtgtggtcggagatggagttcgcgtgg
cgggtgcgctccaatgatgctccgtgggtactcgtgacgggcaccaacggcaagacgacg
acgacgcagatggtcgcggccatggccgcggcggcgggcgttgacgtgaaggcctgcggc
aacatgggcgtctcggtgatcgacgccgcacgggaggggcacgcgttgctcgctgtcgag
atcgcaagccttcagttgcacttcactcacacggtgtcgccagcggccgccgtgtgcctc
aatgccgacaccgaccacctcgactggcacggctctgtcgaggcgtatcgcgccgacaag
gcgagggtctaccgcggcgtcagagttgctgccgtctacccagctcacgatcgcatggtg
gaggccatggtcgaggacgccgacgtggtggaaggctgtcgcgcgatcggcgtcaccgct
ggctcgcctgcggtatcgcagcttggcgtcgtcgacggctacttggtcgacagggcgttc
acgccgcagcggcgcacagaagccctcgagttgggacacgtggacgacctcgcccacctc
gttgcgggagacgtgccgacgtacgtggtgacgaacgcgctgagcgccgccgccctggca
cgcgccgtggacgttccacgcgaggcgatcagggacgggctgcggggcttcgccctggac
agccatcgcacggcgtttgtcgcgacgatcgacacggtcgcctacgtcgatgactcgaag
gcgaccaacgcgcatgcagcgcttgcagccttcggagggaagaagctttcctcggtggtg
tggatcgctgggggcctggccaagggccaggacttcgacgccttggtcggtcaggtgcgt
gaccggttgagggcagtggtgctcatcggtgtcgatccggaaccgcttgccaccgccctg
gccgaacacgccgccgatatccctgtgaagcgcatcggcccgggtgacactgtgatgcgt
gacgccgtcgccgcggcacgcggctttgcgcagcaaggcgacaccgtgctcttgtcgcca
gcatgcgcatccatggatcaattccgcagctacgcggacagaggagaagccttcactgag
gaagtgagggccttgcagggaggatga
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