Demequina sp. TMPB413: LGT36_006790
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Entry
LGT36_006790 CDS
T08088
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dem03016
]
LGT36_006790 (truB)
Enzymes [BR:
dem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LGT36_006790 (truB)
Transfer RNA biogenesis [BR:
dem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LGT36_006790 (truB)
Prokaryotic type
LGT36_006790 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UPU89628
LinkDB
All DBs
Position
complement(1401783..1402736)
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AA seq
317 aa
AA seq
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MARRVDEPTPGLLLVDKPAGWTSHDVVARARRLLGTRKVGHAGTLDPMATGLLVLGVGRA
TRLLTYVTGHDKSYAATIRLGQSTITDDAEGEVTATTDASHVTADAIAAAVAEFTGDISQ
VPSSVSAIKVNGERSYARVRAGEDVALAARPVTVSRFEVLDVRRADGFVDVDAAIDVSSG
TYIRALARDVGAALGVGGHLTALRRTSVGRFAVASALTVDALGELADAGRPLPLIPLDDA
AKAALPAIELSAEEAINVGYGRPLKERKGELTKPAHDDDFAHDAVAVAPDGSVIAIVRRV
RGAAKPVMVFRPSGGAS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgtcgagtcgacgagcccacgccgggcctgctgctggtcgacaagcccgcaggg
tggacctctcatgatgtggtcgcgcgcgctcgtcgcctactcggcacccgcaaggtaggg
cacgcaggcacgcttgatccgatggcgaccggcctgctcgtgttgggcgtcggccgcgcg
acgcgcctgctcacctacgtcaccggccacgacaagtcgtatgcggcgaccattcgcctc
ggtcagtccaccatcacggacgacgccgagggcgaggtcacggcgacgacagacgcttcc
cacgtgacggccgacgccattgcggcggcggtcgccgagttcacgggcgacatttcccaa
gtccccagttcggtgagcgcgatcaaggtgaacggggaacgttcctatgctcgcgtgcgc
gctggcgaagacgtggcgctggccgcccggccggtgacggtctcgcgattcgaggtgctc
gacgtgcgacgggcggacgggtttgtcgacgtcgacgccgcgatcgacgtgtcgtctgga
acctacatccgcgcgctcgcccgcgacgttggcgccgcgctgggcgtcggggggcacctg
accgcgctgcgccgtaccagcgtcggccgttttgccgtggcctccgcgctgacggtcgat
gcgctgggtgaactggccgacgcgggccgcccgctcccgctcatccctcttgacgacgcg
gccaaggcggccttgcctgccatcgagttgagcgcggaagaggcgatcaatgtggggtac
ggccgaccgctcaaagaacgcaagggcgaactgaccaagcccgcgcacgacgacgacttc
gcgcacgacgccgtggccgtcgcgccagacggcagcgtcatcgcgatcgtgcggcgagtg
cgcggagctgccaagccggtgatggtgttccggccgagtggtggggcgtcctga
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