Demequina sp. TMPB413: LGT36_006915
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Entry
LGT36_006915 CDS
T08088
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
dem
Demequina sp. TMPB413
Pathway
dem02020
Two-component system
dem02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGT36_006915
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LGT36_006915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dem03021
]
LGT36_006915
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dem02035
]
LGT36_006915
Transcription machinery [BR:
dem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGT36_006915
Bacterial motility proteins [BR:
dem02035
]
Flagellar system
Flagellar assembly proteins
Stator
LGT36_006915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Tnp_4
RIF5_SNase_1
HTH_37
GerPB
Motif
Other DBs
NCBI-ProteinID:
UPU89651
LinkDB
All DBs
Position
complement(1427918..1428718)
Genome browser
AA seq
266 aa
AA seq
DB search
MTTQEADLDTLVVVHPMAATWEVLATGDAAARLDARDQLITHYAPLVTQIATRMIGRLPD
SVELADLVSYGMFGLIDAIEKFEVGRGFKFETYAATRVRGSIIDELRAADWVPRSVRSKA
RAVETATRNLEQHLLRQVTDSDVAEELGWATSEVRTVRAQVALSHIGALDSLGVGDDTTS
IENVAALAVPGASSSVEVREAHALLATAVQGVRDREQQVLHLYYYENLTLAQIGQILGVT
ESRVSQIHSAAVKKLRESLEQTGAFA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcaagaagcagacctcgacacgcttgtcgtcgtccatccgatggcggctacc
tgggaagtgctggccacgggagacgcggcagcccgcctcgacgcacgcgatcaactcatc
acgcactacgcccccctcgtgacgcagatcgcgacccgcatgatcggccgactgcctgac
tcggtcgaactcgccgacctcgtctcctatggaatgttcgggctgatcgatgccatcgag
aagttcgaggtgggcagaggcttcaagttcgagacctatgcggcgacgagggtgcgcggc
tcgatcatcgacgagttgcgcgccgccgactgggtgccgaggtccgtgcgatcgaaggcg
cgggcggtagagacggctacccgcaacctcgaacaacacttgctacgccaggtgaccgac
agcgacgtggcagaagaactggggtgggccacgtcggaggtacgtacggtgcgtgcgcag
gtcgcgctcagccacatcggcgccctcgactcactcggcgtgggcgacgacaccacctcg
atcgagaacgtcgcggcgctcgcggttccaggggcgtcgtcgtccgtcgaggtgagggaa
gcccacgccctcctcgcgacagcagtgcagggcgttcgagaccgcgagcagcaggtactc
cacttgtactactacgagaacctgactctcgctcagatcggccagatccttggcgtgacg
gagtctcgggtctcccagatccactcggctgccgtcaagaaactgcgcgaaagcctcgag
cagacgggcgcctttgcctag
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