Demequina sp. TMPB413: LGT36_007750
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Entry
LGT36_007750 CDS
T08088
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
dem
Demequina sp. TMPB413
Pathway
dem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LGT36_007750 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dem03019
]
LGT36_007750 (orn)
03009 Ribosome biogenesis [BR:
dem03009
]
LGT36_007750 (orn)
Messenger RNA biogenesis [BR:
dem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LGT36_007750 (orn)
Ribosome biogenesis [BR:
dem03009
]
Eukaryotic type
Pre-60S particles
RNases
LGT36_007750 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UPU87174
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All DBs
Position
1596166..1596771
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AA seq
201 aa
AA seq
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MSDAPLVWIDCEMTGLDLTGDALIEVACIVTDAELNPLGDGVAVVIKPPVGAVEAMSDFV
REMHVTSGLLPELEAGFSMEEAQRLVVEYVKEHVKGFRAPLAGNTVGMDKAFLERDMPEL
MDLLHYRVVDVSSIKELVRRWYPRVFFNAPAKTGGHRALGDIEDSIQELRYYRESIFAQA
PGPDSDAAKAAAAAVVEAHSH
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcacctttggtttggatcgactgcgagatgacgggcctcgatctcaccggc
gacgccctcatcgaggtggcgtgcatcgtcaccgatgcggaactcaaccccttgggagac
ggcgtggcggtcgtcatcaaaccccctgtcggggcggtcgaagcgatgagcgacttcgtg
cgcgagatgcacgtcacctctggcctgctccccgaactcgaggcaggattctcgatggaa
gaggctcagcggctcgtcgtggaatacgtcaaggaacacgtcaagggcttccgggcgccg
ctcgccggaaacacggtgggcatggacaaggccttcctcgagcgtgacatgccagagctc
atggacctgctgcactaccgcgtcgttgacgtgagctccatcaaggaactcgtgaggcgt
tggtacccgcgcgtgttcttcaacgcaccggccaagacaggcgggcaccgcgctctcggc
gacattgaggactcgattcaagaactgcggtactacagggagtcgatcttcgcccaagcg
ccgggtcccgactccgacgcagcgaaggccgccgctgccgccgtggtcgaggctcactct
cactaa
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