Demequina sp. TMPB413: LGT36_008375
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Entry
LGT36_008375 CDS
T08088
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem00300
Lysine biosynthesis
dem01100
Metabolic pathways
dem01120
Microbial metabolism in diverse environments
dem01230
Biosynthesis of amino acids
Module
dem_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LGT36_008375 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dem01002
]
LGT36_008375 (dapE)
Enzymes [BR:
dem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LGT36_008375 (dapE)
Peptidases and inhibitors [BR:
dem01002
]
Metallo peptidases
Family M20
LGT36_008375 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UPU87291
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All DBs
Position
complement(1732504..1733673)
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AA seq
389 aa
AA seq
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MSLPVAPGTPVEDLARALIDIPSVSGDEQAIADAVEEALRSCGHFEVTRLGDSIVARTTL
GLAERIIIAGHLDTVPIKDNVPSCLSDDGTEVIGRGAVDMKAGVAVQLALAVELAAPTRD
VTWIFYDNEEVEASRSGLGRVVRERPDLVEGDFAILGEPTSAVIEGGCNGTLRCEVSLAG
KAAHSARAWKGVNAVHLAAPLLTALSNHEAANIEVDGLAYREGLNAVRISGGIAGNVIPD
ECTVTINYRFAPGADVQTAKQRVIDFIDAAYAEADADAGAGAVRTVTWTDESAAARPGLD
AAIAQDFVAAVAATGALPPRAKLGWTDVARFGELGIPAVNYGPGDPELAHASGDAERCPI
EHMRACHAALKAWLTAPPSSSNTGDQEDL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcccgtcgctcccggcactccggtggaggacctcgccagggccttgatcgat
atcccatccgtctcgggcgacgagcaagccatcgccgacgccgtcgaggaggccctacgt
tcttgcggccactttgaggtcacgaggcttggcgactccatcgtcgcgcgcacgacgctg
gggttggcagagcgcatcatcatcgcgggtcacctggacaccgttccgatcaaggacaac
gtgccgtcgtgcctttcagacgacggcactgaggtgatcgggcgcggcgccgtcgacatg
aaggcgggcgtcgccgtccaactcgcgctggccgtagaactcgctgcccccaccagggac
gtcacctggatcttctacgacaacgaagaggtcgaggcgtccaggtcgggcctaggccgt
gtcgtgagggaacgccccgacctggttgagggcgacttcgccatcttgggtgagccaacg
tcggccgtgatcgagggtggctgcaacgggactttgcgatgcgaggtctcgctcgcaggc
aaggccgctcactcggccagggcatggaagggcgtcaacgcagtgcacctggcggcgccg
ctactgacggcactgagcaaccacgaggccgcgaacatcgaggtcgacggcctggcgtac
cgcgagggcctgaacgccgtgcggatctctgggggcatcgccggcaatgtcatcccggat
gagtgcaccgtgacgatcaactatcgcttcgcccctggcgcggacgttcagacggccaag
cagcgagtcatcgacttcatcgacgccgcctacgcggaggcagacgccgacgctggggca
ggtgcggtgcgcacagtcacttggacggacgagtcggcagcagcgagaccggggctcgac
gccgctatcgctcaagactttgtcgcggcggtcgccgcgaccggcgcgctaccgccgcgc
gcgaaactcggatggacggacgtggctcgcttcggagagttgggcatcccggccgtgaac
tacggccctggagaccctgaactcgcgcacgcttcaggcgacgccgagcgttgccccatt
gaacacatgcgcgcgtgtcatgcagcgcttaaggcgtggttgacggccccgccttccagt
agcaacaccggcgatcaggaggatctgtga
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