Demequina sp. TMPB413: LGT36_011410
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Entry
LGT36_011410 CDS
T08088
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem00521
Streptomycin biosynthesis
dem00523
Polyketide sugar unit biosynthesis
dem00525
Acarbose and validamycin biosynthesis
dem00541
Biosynthesis of various nucleotide sugars
dem01100
Metabolic pathways
dem01110
Biosynthesis of secondary metabolites
dem01250
Biosynthesis of nucleotide sugars
Module
dem_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LGT36_011410 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LGT36_011410 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LGT36_011410 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LGT36_011410 (rfbB)
00525 Acarbose and validamycin biosynthesis
LGT36_011410 (rfbB)
Enzymes [BR:
dem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LGT36_011410 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UPU87852
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Position
complement(2367800..2368792)
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AA seq
330 aa
AA seq
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MKALVTGGAGFIGSNFVRLTLEERPDVEMTVLDALTYAGNEASLPDDERVTLVKGDIAEP
ELVHDLVAEHDLVVHFAAESHNDNSLDNPWPFVQTNIIGTYQLLEAVRRHGKKLHHVSTD
EVYGDLELDDPAKFTAETPYNPSSPYSSSKAASDLLVRAWVRSFKVEATISNCSNNYGPA
QHVEKFIPRQITNVLDGIRPKLYGKGENVRDWIHVDDHNRAVWTIIDKGRAGETYLIGAD
GEMDNKSVIEMILEQMGQDADAYDHVSDRPGHDMRYAIDSTKLREELGWEPVYKDFAAGL
AATIAWYRDNEPWWRAKKLETEMKYERLGR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcttgtcaccggcggcgccggctttattggctccaactttgtgcggttgacg
ctcgaggagcgtcccgacgtggagatgacggtgctcgacgccctcacctacgccggcaac
gaggcctcgctccccgatgatgagcgggtcaccttggtcaagggcgacatcgccgagcct
gaactggtccatgacctggtggcggagcacgatctggtagtccacttcgcggcagagagt
cacaacgacaactcgctcgacaacccgtggccatttgtgcagaccaacatcatcggcacc
tatcaactgctcgaggcggtgcgccgccacggcaagaagttgcaccacgtctcgaccgac
gaggtctatggcgacctcgagttggacgaccctgccaagttcacggcggaaacgccctac
aacccgtcctctccatactcgtcctcaaaggccgcctcggatctgttggtacgcgcctgg
gtcaggtccttcaaggtcgaggcgaccatctccaactgctccaacaactacgggccagcg
cagcacgtggagaagttcattccccgccagatcacgaacgtgctcgacgggattcgcccc
aagttgtatggcaagggcgagaacgtgcgcgactggattcacgtggacgaccacaaccgc
gccgtctggaccatcatcgacaagggtcgcgctggcgagacgtacctcattggcgccgac
ggcgagatggacaacaagtccgtcatcgagatgatcctcgagcagatgggccaagacgcc
gacgcatacgaccacgtcagcgaccgccccggtcatgacatgcgttacgcgatcgactcg
accaagctgcgcgaggagctgggctgggagccggtctacaaggacttcgccgccggcctc
gccgccacgatcgcctggtaccgcgacaacgagccgtggtggcgcgccaagaagctcgag
actgagatgaagtacgagcgcctggggcgctag
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