Demequina sp. TMPB413: LGT36_011470
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Entry
LGT36_011470 CDS
T08088
Name
(GenBank) extracellular solute-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
dem
Demequina sp. TMPB413
Pathway
dem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LGT36_011470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dem02000
]
LGT36_011470
Transporters [BR:
dem02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
LGT36_011470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
UPU87863
LinkDB
All DBs
Position
complement(2377894..2379282)
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AA seq
462 aa
AA seq
DB search
MSFIPKTSHPAGARRPAAIALGLAGALSMAACTPPGTTDDEPTVDSTAVAAPVTGDAPSC
GADPVTLEAYVETGFPVFNELTAEFEKQFPNVTFNTREDQFAVITQNAPRVLVDSPPDLM
RLPQVSELAKDGLLYDLDEYAAAFGWDEWPSSQLEQMRVNADGQRGDGPLYAMGINFSMT
GVFYNKELAAQIGMTEAPKTLEEFDGYLQAAKDAGITPMAQFNGGATGGLAFPLQALMAS
YGDPSEINSWIYQREGATIDTPANLEATEHLNSWIEAGYFADDINSMDYSQMMSRFIGGE
SLFIFNGDWESGNLDAQMPGNAGFFLMPPLEEGGQLGAMSAPLTYGISANAASPDCAAFF
LNWVATDETARTIDIEVGGSHPMGPTDAFMPDIDPASVTAQTLAAGATVGENNGAMDFIA
NATGAIYAKGWTPNLQKMFAGEQTPEGLLASVQASYEDEIGG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcattcccaagaccagccatccggcgggtgccaggcggcctgccgctatcgcg
ctcggcctcgctggcgctctctccatggcggcctgcaccccgccaggaaccacagacgac
gagccgacggtcgactccaccgcggttgccgctccagtgaccggcgatgcgccctcctgc
ggcgccgatccggtcacgcttgaggcgtacgtcgagacgggcttccctgtgttcaacgag
ctcacggcggagttcgagaagcagttccccaacgtcacgttcaacacccgtgaagaccag
ttcgccgtgatcacgcagaacgcgcctcgcgttcttgtcgactccccgccagacctcatg
cgcttgcctcaggtttccgagctcgccaaggacgggctgctgtacgacctcgacgaatac
gcggcagcctttgggtgggacgagtggccctcttcgcagctcgagcagatgcgcgtcaac
gccgacggacagcgtggcgacggccccctgtacgccatgggcatcaacttctccatgacc
ggcgtgttctacaacaaggagctcgcggcgcagatcggcatgaccgaagcaccaaagacg
cttgaggagttcgacggctacttgcaggcagccaaggacgcaggcatcacgccgatggcg
cagttcaatggcggcgccacgggaggcctcgcgttccctctgcaggcactgatggcgtcc
tatggcgaccccagcgagatcaactcgtggatctaccagcgcgagggcgcgacgatcgac
actccggccaacctcgaagcgaccgagcacctcaacagctggatcgaggcaggctacttc
gcggatgacatcaactcgatggactactcgcaaatgatgagccggttcatcggcggcgag
tcgctgttcatctttaacggcgactgggagtcgggcaacctcgacgcccagatgcctggc
aacgcaggattcttcctgatgcccccgctcgaagagggaggccaactgggagccatgtcg
gcgcctttgacctacggcatctcggccaacgcagcgagccctgactgcgcggcgttcttc
ctcaactgggtcgcgaccgacgagaccgcgcggaccatcgacatcgaggtcggcggatcg
caccccatgggcccgacagacgcgttcatgcctgacatcgacccagcctccgtgaccgca
cagacactcgcggccggtgcgaccgttggcgagaacaacggcgcgatggacttcatcgcg
aacgcaacgggagcgatctacgccaagggctggacgccgaacctgcagaagatgttcgct
ggtgagcagaccccagagggcctcctcgcttctgtccaggccagctacgaggacgagatc
ggcggctga
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