Demequina sp. TMPB413: LGT36_012480
Help
Entry
LGT36_012480 CDS
T08088
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dem03032
]
LGT36_012480
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_012480
Enzymes [BR:
dem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LGT36_012480
DNA replication proteins [BR:
dem03032
]
Prokaryotic type
DNA Topoisomerases
LGT36_012480
DNA repair and recombination proteins [BR:
dem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LGT36_012480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UPU88047
LinkDB
All DBs
Position
complement(2577305..2578429)
Genome browser
AA seq
374 aa
AA seq
DB search
MPRLRTSRPSEPGIRRLRRGRGFRYVHASGEPVSGEDRERIEQLVIPPAWQDVWICPSPT
GHLQAVGTDAAGRRQYLYHPRWRERQERTKRQHILDIAKALPAAREHVQQDLERGDFSRA
HALAVAFRLLDLGLFRVGGEAYAAANGSYGLATLLKDHVTVSADGLVFDYVAKSGIRRHV
VLNDPQCEAALATMKRRRSGGNELLAWRDEAPPATWHDITSADINAYLHDVLGQEASAKD
FRTWHGTVLAARALGDAPPADHVSPSARKRIVAAAMREVAEALGNTPAVARASYVDPRVI
DLWHDGVSLAPVVDALGEASAPGAPPGARPAQAQEALEQAVLALLTQEPEAAARRVRRLA
GTTSSRGKRGRAAA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctacgcacctctcgaccctcggaaccgggcatccggcgcctgcgcagaggc
aggggcttccgctacgtgcacgcctcgggcgagcccgtctccggagaagaccgcgagcgc
atcgagcaactggtgattccgccagcgtggcaagacgtgtggatttgccccagccccact
ggtcacctgcaggccgtcggcaccgatgccgctgggcggcgccaatacctgtaccacccg
cggtggcgcgaacgccaagagcggaccaagcgacagcacattctcgacatagcgaaggcg
ttgccagccgcccgcgagcatgtccagcaggatctcgagcgaggtgacttctcgcgggcc
cacgcgcttgccgtcgcgttccggctgcttgacctcggtctgttcagggtcggcggcgag
gcatacgcggcggcgaacggcagttacggtctcgcgaccctgctcaaggaccacgtgacc
gtcagcgctgacggcctcgtcttcgactacgtcgccaagtcgggcatccggcgccacgtg
gtgctcaacgacccgcagtgcgaggcggcgctcgccacgatgaagcgtcggcgttctggt
ggcaacgagcttctcgcgtggcgcgacgaggcgcccccagcgacttggcatgacatcacg
agcgcagacatcaatgcctaccttcacgacgtgctgggccaggaggcgagcgccaaggac
tttcgcacgtggcatggcacagtcttggccgcgcgcgcccttggcgacgccccgccggcc
gaccacgtgtcccccagtgctcgcaagcgcatcgtcgccgctgccatgcgggaggtagcc
gaggcgctcggcaacacccctgccgtcgcgcgagcgtcatacgtcgacccgcgggtgatc
gacttgtggcacgacggggtgtcgctcgcgccggtggtggacgcccttggcgaggcgtcg
gctcctggcgcccctcccggcgcccgcccagcccaagcgcaagaggctctcgagcaagcg
gtcctcgccctgctcacgcaagaacccgaggccgcggctcgccgggtgcggcgcttggcg
ggcacgacctctagccgcggtaagcgcggcagggccgccgcctga
DBGET
integrated database retrieval system
