Demequina sp. TMPB413: LGT36_012655
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Entry
LGT36_012655 CDS
T08088
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem03030
DNA replication
dem03430
Mismatch repair
dem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGT36_012655
03430 Mismatch repair
LGT36_012655
03440 Homologous recombination
LGT36_012655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dem03032
]
LGT36_012655
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_012655
Enzymes [BR:
dem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGT36_012655
DNA replication proteins [BR:
dem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGT36_012655
DNA repair and recombination proteins [BR:
dem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGT36_012655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
RNase_T
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
UPU88081
LinkDB
All DBs
Position
2619458..2620357
Genome browser
AA seq
299 aa
AA seq
DB search
MNERSARAGWPLALTREETLCTMRLARAYGAPAKLGECCAHFGVPLNEAHAALADAEAAA
GLLAAYIAASASRREWDGWLALGESLRWPAPPPRGVAPVLRGTTRPGSAVLARAVGHFAP
VDDVAGADEYLDLLDRVLLDRKISVPERRALDGMATTLGLGAADVARLNRHYMLGVVDAT
CADDQLTHEERALVIQLAGLLDLADLEVEGLLAAAQARVATVVEGVELKPGDLVVFTGFP
EARKAQLREVAEARGLVVWPAVKRGVAAVIAQDPGSGSGKARKAREYGIPVVGDGLLAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgagcgcagcgcgcgcgccgggtggccgctcgcactcacccgcgaggagacgctg
tgcaccatgcgcctggcccgcgcctacggtgcgcccgccaagctgggtgagtgctgcgcg
cactttggagtgccccttaacgaggctcacgcggccctcgccgacgctgaggccgcggcc
ggtttgctcgccgcctacatcgcggcgtctgcctcgcggcgcgagtgggatgggtggctc
gcgttgggtgagtcgttgcggtggccggcaccgcctccgcgtggggtggcgccggtgctc
aggggcacgacgcgtcccggcagtgccgtcctggcgcgggcggtggggcacttcgccccg
gtggacgacgtcgccggcgccgacgaatacctggacctgctagaccgcgtgctgctggac
aggaagatctctgtaccggaacgcagagcattggacggcatggcgacgacgctggggctg
ggcgccgccgacgtggcccggctgaaccgtcactacatgctgggcgtggtggacgcgacg
tgtgcggacgatcagctcacgcacgaggagcgggcgctcgtgatccaactggcggggcta
ctggacttggctgaccttgaggtggagggtctgctggcggcggctcaggcacgggtggcg
acggtggtcgagggcgtggagctgaagccgggggacctggtggtgttcacggggttcccg
gaggcgcgcaaggcgcaactgcgtgaggtggcggaggctcgggggctggtggtgtggcct
gctgtgaagcggggtgtggcggcggtgattgctcaggacccagggagcggatcgggcaaa
gcgcgcaaggctcgggagtacgggatcccggtggtgggggacgggttgctggctgggtaa
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