Demequina sp. TMPB413: LGT36_012905
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Entry
LGT36_012905 CDS
T08088
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dem03021
]
LGT36_012905
Transcription machinery [BR:
dem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGT36_012905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
MarR_2
HTH_11
HTH_28
GntR
HTH_3
GerE
MarR
HTH_31
Phage_antitermQ
HTH_24
Trp_repressor
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UPU88129
LinkDB
All DBs
Position
complement(2666437..2667237)
Genome browser
AA seq
266 aa
AA seq
DB search
MLDFSPSRPASLGAYAFQELATRPTPMPDDGLSAEECLVIDNMGLARRIARRFAGSVGDP
HDLGQVALLGLVKAAKRFDPDRGYPFQAFASITISGEVKRYLRDSGWAVRPPRPVQELAI
AVTTALPELEQTLQHAPRSAELAEHLGVERQEVEEAIASARGAFTVSLDRLGDGGMAGEH
SIEDLAEGSIAAIDIHRAVASLPERDQKVLAMRFADGRTQREIAKALNVSQMQISRTITK
SLARLRAALEEPALRSDECGGRQLAG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacttttccccttcccggccagcgtcgcttggcgcgtacgccttccaggaactc
gcaaccaggcccacgccgatgcccgacgatgggctcagtgccgaggaatgcctcgtcatc
gacaacatgggtttggcgcgacgcatcgccaggcgcttcgcgggctcggtgggtgatcct
cacgatctgggccaggtggcgctgctcggcctggtgaaggcagccaagcgattcgacccc
gatcgcggctacccgtttcaggccttcgcgtcgatcaccatctccggcgaggtcaagagg
tacctgcgggattcaggctgggcggtccgaccgccccgacccgtccaggaactggccatc
gccgtaacgactgcgttgcccgaactagagcaaacgctgcagcatgcgccaaggtcggcg
gaacttgcggaacacctgggtgtggagcgacaggaagtcgaagaagccatcgcgagcgcg
aggggtgcgttcaccgtcagccttgaccggctgggggatggcgggatggccggggagcat
tcgatagaagacctggccgagggatccattgcggccattgacatccacagggcggtggca
agcctgcccgagagggaccagaaggtcctggcgatgcgctttgcggatgggcgtactcag
cgggagatcgcgaaggccctcaacgtgtcgcaaatgcagatctcgcgcaccattacgaag
tcgcttgcccggctccgggccgcgctggaggagcctgctctgcgttcggatgagtgcgga
ggacgccagctggcggggtag
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