Demequina sp. TMPB413: LGT36_013220
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Entry
LGT36_013220 CDS
T08088
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_013220 (radA)
DNA repair and recombination proteins [BR:
dem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LGT36_013220 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
AAA_22
AAA_16
DUF7125
AAA
nSTAND3
nSTAND_NTPase5
NTPase_1
KdpD
DAP3
IstB_IS21
AAA_5
NACHT
GvpD_P-loop
AAA_30
AAA_18
ABC_tran
AAA_14
AAA_24
Ribosomal_L44
AAA_29
RsgA_GTPase
TniB
MCM
ATPase_2
TIP49
Hpr_kinase_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
UPU88187
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Position
2731294..2732673
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AA seq
459 aa
AA seq
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MATTKKTAPAYRCTECGWTAVKWVGRCSECQQWGTVVEVGATAGPSTKATAVATPARPIA
DVPRSESARHPTKVSEFDRVLGGGLVAGAAVLLAGEPGVGKSTLLLEVAARAARDGTDVL
YISGEESAGQVRLRAERMGALEPRLKLAAETDLGVVLAHLAAEAPGLVIVDSIQTIASAA
VEGSPGGVSQVREVAAALIQATKSSGVPMVLVGHVTKDGSVAGPRLVEHLVDVVCQFEGD
PHSPLRLLRALKNRFGSVDEVGCFQLVDSGIEEVPDPSGLFLTQTGEPIAGTCATITVDG
RRALPAEIQALVAPSALSNPRRATSGMDSARVSMMLAVLHRRVGVALVADDVYVSTVGGA
KVAEPAADLALALALASARADRPVRKGFVAVGEVALSGAVRPVSAIGTRLSEAARLGFTH
AIVPAGAEASAKEAVGGRMTVIAVESLADAVRAGVTPAQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccactaccaagaagaccgcgcccgcgtatcggtgcaccgaatgcggctggaccgcg
gtcaagtgggtggggcggtgtagcgagtgccagcagtggggaactgtggtcgaggtaggc
gccaccgcaggccccagcaccaaggccacagcggtcgccacacctgcgcgtcccatcgcc
gacgttccccgcagtgagtcagctcgtcaccccaccaaggtgtcggaatttgaccgcgtg
ctgggtggcggcttggtggcgggcgcggcggtactcctggcaggcgagccgggcgtcggc
aagtccacgctcttgctcgaggtggcagcacgagcggctcgcgacggcaccgacgtcttg
tatatctctggtgaggagtccgcggggcaagtgcgcctgcgtgccgaacgcatgggcgcg
ctcgagccgcgactcaagctcgccgcggagacggacctgggcgtggtgttggcccacctc
gcagccgaggccccaggactggtgatcgtcgactcgatccagaccatcgcgtcggcggct
gtcgaaggctcgccagggggagtctcgcaagtgcgtgaggtcgccgcggcgctcattcag
gccaccaagagctccggcgttcccatggtgctcgttggccacgtcaccaaagacggctcc
gtggctgggccgcgactcgtggagcacctcgtggacgtcgtgtgccagtttgagggcgat
ccgcactcgccgctccggctgctgcgagcgctcaagaaccgcttcggttcggtagacgag
gtcgggtgcttccagctcgtcgactctggcatcgaagaggtccccgacccttccggtctg
ttcttgacgcaaacgggggagcccatcgccggcacatgcgccacgatcaccgtggacggc
aggcgcgcgcttcccgcggagatccaggctctcgtcgcgccatcggcgctatccaacccg
cgccgtgccacatccggcatggactcggccagggtgtccatgatgctggcagttctccac
cggcgcgtgggcgtcgcgctcgtcgcggacgatgtctacgtttccaccgtcggcggcgcc
aaggtcgcagagcccgccgcagacctggccctcgcgctcgcgctcgcttccgcgcgcgcc
gatcggccggtgcgcaaaggcttcgtcgctgtaggcgaggtggcgctatcgggcgccgtg
cggccagtgagcgcgatcggtactcggctgtcagaggcagcccggctgggcttcacccat
gccatcgtgcccgctggtgccgaagcgtcggcaaaggaagccgtcgggggacgcatgaca
gtgattgcggtggaatccctcgccgacgccgtgagggctggcgtcacgccagcccagtag
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