Candidatus Doolittlea endobia: MHIR_DE00011
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Entry
MHIR_DE00011 CDS
T04480
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
den
Candidatus Doolittlea endobia
Brite
KEGG Orthology (KO) [BR:
den00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
den03009
]
MHIR_DE00011 (rluB)
Enzymes [BR:
den01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
MHIR_DE00011 (rluB)
Ribosome biogenesis [BR:
den03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MHIR_DE00011 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CUX96372
UniProt:
A0A143WRL4
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Position
I:complement(11028..11834)
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AA seq
268 aa
AA seq
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MSKSEKLQKVLSRVGQGSRRKIEAIIEQGRVSVDGKVAILGGRVDVFSSTKIRIDGRIIS
IRPRENTVCRVLAYYKPIGELCAYRDPKGRPTVFNRLPHLNNSRWIAIGRLDINTSGLLL
FTTDGELSNRLMHPRYEIEREYAVRVFGTLHADKQRQLIRGVQLDDGQAAFRSLTFKGGK
GLNKWYNITLKEGRNREVRRLWEAVGMQVNRLIRVRYGGVMLPKGLPRGGWAELSLATIN
YLREKVQLPLESCTKLSIKSNRHRLKVM
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaagcgaaaaacttcaaaaagttttatctcgcgtcgggcagggttctcgccga
aaaattgaagccataatcgagcaaggccgcgtcagtgttgacggcaaagttgctatactc
ggtggtcgagttgacgtctttagcagcacaaaaatccgtattgatgggcgaattatctct
attagaccgcgagaaaatactgtatgccgcgtattggcttattataagccgataggcgaa
ttgtgtgcgtaccgcgatcctaaaggtcgaccaacggtgtttaatcgccttccgcatctc
aataattcccgctggatagctattggacgactggacatcaatacttcaggattgttgtta
ttcactacagacggggaactaagcaatcgcttaatgcatcctcgctatgaaattgaacgt
gaatatgctgtccgtgtctttggcacattgcatgctgacaagcaacgtcagttaatccgc
ggcgtgcagctggatgatggccaggcggctttccgtagtttaaccttcaaggggggcaaa
ggtctcaacaaatggtacaatatcaccttgaaggaaggtcgcaatcgtgaagtgaggcgt
ctgtgggaagcagttggaatgcaggtcaatcggcttatccgtgtgcgttacggcggcgtt
atgctgccgaaagggcttcctcgtggaggatgggctgaactatcacttgcgacaataaat
tacttgcgtgaaaaagtgcagttgccgcttgaatcttgcacaaaactgtcgatcaagagc
aatcgccaccgattgaaagtaatgtag
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