Candidatus Doolittlea endobia: MHIR_DE00042
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Entry
MHIR_DE00042 CDS
T04480
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
den
Candidatus Doolittlea endobia
Pathway
den03030
DNA replication
den03430
Mismatch repair
den03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
den00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHIR_DE00042 (dnaQ)
03430 Mismatch repair
MHIR_DE00042 (dnaQ)
03440 Homologous recombination
MHIR_DE00042 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
den03032
]
MHIR_DE00042 (dnaQ)
03400 DNA repair and recombination proteins [BR:
den03400
]
MHIR_DE00042 (dnaQ)
Enzymes [BR:
den01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MHIR_DE00042 (dnaQ)
DNA replication proteins [BR:
den03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MHIR_DE00042 (dnaQ)
DNA repair and recombination proteins [BR:
den03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MHIR_DE00042 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Fiji_64_capsid
DNA_pol_A_exo1
GcvP2_C
Motif
Other DBs
NCBI-ProteinID:
CUX96406
UniProt:
A0A143WRH3
LinkDB
All DBs
Position
I:complement(45134..45883)
Genome browser
AA seq
249 aa
AA seq
DB search
MSINITRQIVLDTETTGMNKSGVHYEGHRIIQIGAVEIINRRLTGRHFHVYLKPNRLVDP
EAFNVHGISNEFLADKPTFSDVANELLHFIYGSELIIHNAPFDIGFMDYEFSMLNGSIAK
IDTFCKITDSLRLARNLFPGKRNSLDALCDRYQIDNSKRTFHGALLDAEILAEIFLLMTG
GQTTMHFFMEGEQDQRDIGKTVQIQRVQRVQTSLKVIYANNKEVIAHEQYLDLVQKKCGK
CIWRTKSAV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaatattacgcgacagattgttctggatactgaaactaccggtatgaacaaa
tcaggagtccattatgaaggacaccgaattattcaaattggcgcggtggagatcattaat
cgccgcctgacaggccggcattttcatgtctatttgaaaccaaaccggctcgtcgatccc
gaagcgtttaatgtgcatggcattagcaacgagtttctggcggataagccgacattttca
gacgtggcaaatgaattgctacactttatctatggcagcgaactgattattcataatgct
ccattcgatatcggctttatggattatgagtttagcatgctaaacggcagtatcgccaag
atcgacaccttttgtaagataacggatagtttacgactagcgcgcaacctgttcccaggt
aaacgtaatagcttagacgcattatgcgatcgatatcagattgataatagtaaacgcacc
ttccacggcgcgttgcttgacgctgaaattttagcagagattttcctgctaatgacaggt
ggccagaccacaatgcattttttcatggaaggagagcaagatcaacgcgatataggtaaa
accgtgcaaattcaacgggtccagcgcgttcagacgtcgctgaaggtgatttatgctaat
aataaggaagtaatagcgcatgagcagtatttagatctggtgcagaaaaagtgtggcaaa
tgcatatggaggacaaaaagcgctgtataa
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