Candidatus Doolittlea endobia: MHIR_DE00069
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Entry
MHIR_DE00069 CDS
T04480
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
den
Candidatus Doolittlea endobia
Pathway
den03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
den00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MHIR_DE00069 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
den03400
]
MHIR_DE00069 (xseB)
Enzymes [BR:
den01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MHIR_DE00069 (xseB)
DNA repair and recombination proteins [BR:
den03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MHIR_DE00069 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
SKA1
DUF4164
Motif
Other DBs
NCBI-ProteinID:
CUX96428
UniProt:
A0A143WRS9
LinkDB
All DBs
Position
I:complement(75988..76236)
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AA seq
82 aa
AA seq
DB search
MPKKAEQPASFETVLKELEQIVTRLESGALPLEQALNEFEHGVHLARQSQKTLQEAEQRV
QILLNDTPDAQLASFAPENDTL
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaaagcagaacaacccgccagttttgaaactgtgcttaaagaactagagcag
atagtgacccgtcttgagtccggtgcactgccgctggaacaggcgcttaatgaattcgag
catggcgttcacctagcgcgacaaagtcaaaaaaccctacaagaagcagaacagcgggta
cagatactcttaaacgatacgccagacgcccaacttgcctcctttgcgcctgaaaatgat
acgctatga
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