Candidatus Doolittlea endobia: MHIR_DE00111
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Entry
MHIR_DE00111 CDS
T04480
Symbol
rsmH
Name
(GenBank) Ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
den
Candidatus Doolittlea endobia
Brite
KEGG Orthology (KO) [BR:
den00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
den03009
]
MHIR_DE00111 (rsmH)
Enzymes [BR:
den01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
MHIR_DE00111 (rsmH)
Ribosome biogenesis [BR:
den03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MHIR_DE00111 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
CUX96454
UniProt:
A0A143WRR6
LinkDB
All DBs
Position
I:118957..119904
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AA seq
315 aa
AA seq
DB search
MSKNSLHTTVLLDEAVRSLNLRSNGVYLDGTFGHGGHSRLILSKLGTQGRLFAMDRDPAA
IEVAQAIKDARFVITHEPFSAMAKYMARWNLLGKVDGILLDLGVSSLQLDDPDRGFSFMR
DGPLDMRMDSTRGQSAAQWLVQASAENIAWILKSFGEERFAKRIAQAIVARNHQKPMTRT
SELAALITNVSPFHDKHKHPATRSFQAIRIYINNELEEIKQALNDALTVLAPSGRLSIIT
FHSLEDRLVKQFIRQHSQKPKVPAGLPLTEAQITSQYQDQRQLKEAGRTQPSAREINHNP
RARSAVLRIAEKLAP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaattctttacataccactgtgttgctagatgaagcggtaaggagtctaaat
cttcgatcaaatggcgtttatctggacggcacctttggacacggtgggcattcacgtctt
attttatccaagcttggtacgcaggggcgactattcgccatggaccgcgatccggcagcc
atcgaggtagcacaagctattaaagatgcgcgctttgttattacacacgaaccgttttcc
gccatggcaaagtacatggcacgatggaatttgctaggcaaagttgacggcatattactg
gatttgggcgtctcgtcgctacaacttgatgatccggaccgtggtttttcatttatgcgt
gacggaccgttggatatgcgtatggatagcacacgtggacaatctgccgcgcagtggctg
gtccaggcatcggcggaaaacatcgcctggatcttgaaatcctttggtgaagagcgtttt
gccaagcgcatcgctcaggcaatcgtagcacgaaatcaccagaaaccgatgactcgcacc
agcgaactagcggcactgattaccaatgtcagcccgtttcatgataagcataaacatccg
gcgacgcgtagctttcaggcgatccgcatttatattaacaacgagctggaagagattaaa
caggcgttgaacgacgcgctgacagtattagctcccagcggaaggttgtcgattatcacc
ttccattcgctggaagatcgcttagtgaaacaatttattcgccagcacagccaaaaaccg
aaggtaccggctggtcttccgcttacagaggcacagatcacctctcaataccaagatcag
cgccaactaaaagaggcaggtagaacgcaaccttcagctcgggagataaatcataaccca
cgcgcgcgcagtgcagtgctccgcattgccgagaagctggcgccatga
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