Candidatus Doolittlea endobia: MHIR_DE00162
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Entry
MHIR_DE00162 CDS
T04480
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
den
Candidatus Doolittlea endobia
Pathway
den03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
den00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MHIR_DE00162 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
den03400
]
MHIR_DE00162 (priA)
Enzymes [BR:
den01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MHIR_DE00162 (priA)
DNA repair and recombination proteins [BR:
den03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MHIR_DE00162 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zeta_toxin
TrwB_AAD_bind
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CUX96497
UniProt:
A0A143WSJ1
LinkDB
All DBs
Position
I:185508..187703
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AA seq
731 aa
AA seq
DB search
MSFVNVTLQVPFARIFSYLLPDNATPTIGGRVRVPFGQRQAIGIVTAIHNHSDVALDKLR
PISDVLDSQSLFSDSLWRILHWAIGYYHYPAGAVLFHALPVLLRQGKPATIAPLWQWFAT
EQGLSTLPKNLKRAPKQQQALASLLRGPVYRHQVSELQLANTALQALRAKGLCDLRLRTA
DTHDWRPEFRVNDKRQRLNTEQAAAVGAIRNEDNRFAAWLLAGVTGSGKTEVYLTVLENI
LTKGQQALVLVPEISLMPQTIARFRERFNAPVEVLHSGLNDNERLAVWMKARRGECAIVI
GTRSALFTPFARLGIIVIDEEHDSSYKQHEGWRYHARDLAVFRAREEKIPIVLGTATPAL
ETIYNVQKKKYRQLTLDKRASSDKPTGQKLLDIKGLALTNGLSTPLLDKMRIHLQADNQV
MLFLNRRGFAPALLCHECGWIAECQRCDHYYTLHQYQRQLRCHYCDSQRPLPYQCLQCGS
TQLVTFGLGTEQLEAALTPLFPSVPITRIDRDTTARKGALENYLNQVQLGGKRILIGTQM
LAKGHHFPNVTLVSLLDVDGAIFSGDFRAAERFAQLYTQVAGRAGRADKQGEVLLQTCHP
EHPLLQTLLHRGYMEFARQTLQERHQAGLPPFTSHIVFRADDHDNHQAGLFLEQLRQLLD
DSPLRDNALWLIGPIPALAPKRSGRFRWQLLLFHPSRLQLQRLVTASLPLVSTLLQSRKV
KWSLDVDPLDN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgtaaatgttacattacaggtgccttttgctcgaatatttagttaccttttg
cccgataacgcgacgccgacaattggggggcgggtcagggttccatttggccaacgtcaa
gctattggcatcgttactgccattcacaatcacagcgatgtagccctggacaagttacga
ccaatcagcgatgtcctcgacagtcaatcattgttttcggacagcctctggcgcatccta
cattgggccatcggatattaccattatccagccggcgcagtactgttccacgctttacct
gttctgctgcgccaaggaaaacccgctacgatagcaccgttgtggcagtggttcgctacg
gaacagggcctcagtacgctcccaaagaatttgaagcgagcacctaaacagcaacaagca
ctggcgtcgctactgcgtggtccggtatatcgccatcaagtgagcgaactgcagttagcc
aataccgcgctgcaggcactacgagccaaagggttatgtgatttgcggcttcggacggca
gatacacacgactggcgtcccgagtttcgggttaacgacaaacggcagaggctaaatacc
gaacaagctgctgctgttggggctattcgcaacgaagataaccggtttgctgcctggttg
ttagccggcgtgacaggttccggcaaaaccgaagtatatctgacagtactagaaaatatt
cttaccaaaggccaacaggcgctggtacttgtaccagaaatcagcttgatgccgcaaacc
attgcccgctttcgcgagcgtttcaatgctccggttgaggttttacactcggggctcaac
gataacgaacgtctagctgtttggatgaaagcgcgacgcggtgaatgcgctattgtcatt
ggtactcgatcggcgctgttcacccctttcgccaggctgggtattattgtcatcgatgaa
gaacatgatagttcttataaacagcatgaaggctggcgctatcacgcacgcgatcttgct
gtttttcgcgcgcgagaagaaaagataccgattgttcttggtaccgctacgcctgctctt
gaaaccatttataatgtgcagaagaaaaaatatcgtcaactcacgttggataaacgtgct
agcagcgataaacccacaggtcaaaaattgttggatataaaagggcttgcgctaaccaac
ggcctctcgacgcctcttttggacaaaatgcgcatacatttacaggctgataatcaggtc
atgctgtttttaaatcggcgtggtttcgcaccagcgttactgtgccacgaatgtggctgg
attgctgaatgccaacgctgcgatcactattatacactgcatcaatatcagcgtcagtta
cgctgtcactactgtgacagccaacgtccgctgccatatcaatgcctgcagtgtggttct
acccagctggtcactttcgggttaggcaccgagcaattggaagcagcacttacaccttta
tttccaagcgtaccaataacacgcatcgatcgcgatactacagcgcgtaaaggagctctg
gaaaattatttaaatcaagtgcagcttggcggcaagcgcattttaattggcactcaaatg
ctcgctaaagggcaccattttccaaatgttacgctggtatcgttactggatgtggatggc
gcaatattttccggagattttcgcgccgccgaacgtttcgcccagttatatacgcaagtc
gccggccgggctggccgcgctgacaagcaaggagaagtattattacagacctgtcatcca
gagcatccacttctgcaaacgttacttcatcgcggttatatggagtttgcgcggcaaact
ttacaagaacgtcaccaggcagggttgccgccttttactagtcacattgtgtttcgggct
gacgatcatgataatcaccaggcgggattatttcttgaacaattacgtcaattgctggac
gacagcccgctgcgtgacaatgcattatggctaataggaccgatcccagcgctagcgccc
aagcgcagtgggcgtttccgctggcaattgttgctattccacccttctcgtctacagtta
caacgcctggttaccgccagtttgccgctagtgagcacactgttacagtcacgcaaagtg
aaatggtcgttggacgtagacccccttgacaattga
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