Candidatus Doolittlea endobia: MHIR_DE00195
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Entry
MHIR_DE00195 CDS
T04480
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
den
Candidatus Doolittlea endobia
Pathway
den00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
den00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MHIR_DE00195 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
den01007
]
MHIR_DE00195 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
den03016
]
MHIR_DE00195 (lysS)
Enzymes [BR:
den01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MHIR_DE00195 (lysS)
Amino acid related enzymes [BR:
den01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MHIR_DE00195 (lysS)
Transfer RNA biogenesis [BR:
den03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MHIR_DE00195 (lysS)
Prokaryotic type
Other AARSs
MHIR_DE00195 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CUX96520
UniProt:
A0A143WS39
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All DBs
Position
I:complement(217483..219003)
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AA seq
506 aa
AA seq
DB search
MLELYLQDSTSQTLHMNNELRSRREKLCQLRQQGIAFPNDFRRDAVCDQLHARYGEKSNE
ELESLNSEVRIAGRMMTRRIMGKASFVTLQDVGGKIQLYVTRDALPETQYNEQFKKWDLG
DILGARGKLFKTHTGELSVHCSEIRLLTKAIRPLPDKFHGLADQETRYRQRYLDLITNDE
SRQTFKARSRIITEIRRFMMANDFMEVETPMMQTIPGAAAARPFITHHNALNIDMYLRIA
PELHLKRLVVGGFERVFEINRNFRNEGLSPHHNPEFTMMELYMAYADYCDLILLVELLLR
TLTQRVLGSSIVRYGDQIFDFGKPFTKMTMKEAICYYCPGTHPEMLDDIASATFMASSLG
IKVDKNWGLGRVQAEIFEETTENYLIQPTFITAYPAEVSPMARRNDDNPFFTDRFEFFIG
GCEIGNGFSELNDAEDQAARFVEQAEAKDGGDNEAMFYDNDYITALEHGLPPTAGLGIGI
DRLIMLLTNKHTIRDVILFPALRPEK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattatacttacaggacagtacttctcagacgctgcatatgaataacgaactg
cgctctcgtcgggaaaaactttgccaattgcgtcagcagggtattgctttccccaacgat
ttccgacgggatgctgtgtgcgatcagttgcacgctcgctacggagagaaaagcaatgaa
gaactagaatcgctgaacagtgaggtccgcattgccggtcgtatgatgacccgccgtatt
atgggtaaagcctcctttgttactttacaggacgtgggtgggaagatccagttgtatgtt
acccgagacgctttgccagaaacgcaatataacgagcagtttaaaaaatgggatctcggc
gacattctaggcgcacgcggaaaattatttaaaacccataccggcgagttgtcggtccac
tgtagcgaaattcgtctattgactaaagcgatccgtcctctgccggataaatttcacggc
ttggccgatcaggaaacccgctatcgccagcgttatcttgatttaatcaccaatgatgaa
tcacgccaaacatttaaagcacgttcgcgcattataacggagattcgccgttttatgatg
gctaacgattttatggaagtggaaacaccgatgatgcagactatccctggtgctgctgcc
gcgcgtccgtttatcactcatcataatgctctgaatatcgacatgtatctgcgtatcgcg
ccggagctgcatttgaaacggctggtagtaggaggatttgaacgggtatttgaaatcaat
cgcaattttcgcaatgaaggcttatcaccacatcataatcccgagttcactatgatggaa
ctttatatggcttatgcggactactgtgatttaattcttctagtggaactgttattacga
accttgacgcaacgggtactcggcagcagtatagtacgttatggcgatcaaatttttgat
ttcggcaagccgtttactaaaatgactatgaaagaagctatctgctattattgtccagga
acccatccggaaatgctggacgatatagcttccgccacttttatggcctcgtcattgggc
atcaaggttgacaaaaactggggacttggacgagttcaggccgagatttttgaagagaca
acggaaaattatctcattcaacctactttcatcaccgcttacccggcggaagtatcgccg
atggcgcgccgcaatgatgataatccattttttaccgatcgttttgaattttttatcggc
gggtgtgaaatcggaaacggtttttcagaacttaacgatgctgaagatcaggcagcgcgc
tttgtcgagcaagctgaagccaaagacggcggcgacaatgaagcgatgttctatgacaat
gactatatcactgcacttgagcacggcttgccgccaactgctggattgggaattggtatt
gatcgcctgataatgctattaactaataagcatactatacgcgacgtaattctgttcccg
gcattgcgccctgaaaaatag
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