Candidatus Doolittlea endobia: MHIR_DE00227
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Entry
MHIR_DE00227 CDS
T04480
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
den
Candidatus Doolittlea endobia
Pathway
den03030
DNA replication
den03430
Mismatch repair
den03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
den00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHIR_DE00227 (dnaX)
03430 Mismatch repair
MHIR_DE00227 (dnaX)
03440 Homologous recombination
MHIR_DE00227 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
den03032
]
MHIR_DE00227 (dnaX)
03400 DNA repair and recombination proteins [BR:
den03400
]
MHIR_DE00227 (dnaX)
Enzymes [BR:
den01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MHIR_DE00227 (dnaX)
DNA replication proteins [BR:
den03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MHIR_DE00227 (dnaX)
DNA repair and recombination proteins [BR:
den03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MHIR_DE00227 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_18
AAA_14
AAA_5
AAA_16
AAA_30
AAA_assoc_2
SKI
VapE-like_dom
RCF1-5-like_lid
nSTAND3
TIP49
AAA_2
AAA_lid_RFC1
TsaE
Motif
Other DBs
NCBI-ProteinID:
CUX96549
UniProt:
A0A143WUK0
LinkDB
All DBs
Position
I:262185..264473
Genome browser
AA seq
762 aa
AA seq
DB search
MSYQVLARKWRPQTFIDIVGQEHILAALANSFSLGRIHHAYLFSGTRGVGKTTIGRLLAK
GLNCHTGITATPCRQCDNCREIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYIPARGRF
KVYLIDEVHMLSCYSFNALLKTLEEPPAHVKFLLATTNPQKLPVTILSRCLQFHLKALDV
KQIRNHLSYVLQKEQIMAEPHALQMLASAADGSMRDALSLTDQAIATGLGEVSDEAVSLM
LGTLNTEQPLALIEALAEADGGAIMATLAQCAARGMDWDNLLVEMLSLLHRLALGQLAPD
QLNSEDNPASKLRLRDLARRLPPSDLQLYYQALIIGRKELPFSPDPRIGVEMTLLRALAF
RPSAVEKMTTVASMEKKTAEFDENRHCDSSATGASGAKRALTQLKLDNTRRAGANIATPA
QDVPKSSSFSSGVNVGKRLITVKKQNTLTAPVSGSWTDWQTTLPSCPQSSWIDIDKEHFR
LIYTGSDCNDEKAESDRQDIVLKSEQEASRALFLPSSSSDSPLPDATTQFLQARIALLKW
QKIKKTKKCGQAPARQKTTVPSLERPASASERTKQQHDDAGKKEPMKTPRPEVYGWRVTQ
QPEVASKPVTTTKSLRTALEHAKTSKLALCLAEESLTRDPWAAQVNRLVVPKVAQQLALN
AWKEDLAPGKICLHLRASQRHLNSASAQSALCTALSDVFGASIDLTIVEDDNLTMKTPLE
WRQEIYEEKLIRAKKAILHDAHIQVLQSFFDAELDEDSIRPV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccaggttcttgcccgtaagtggcgtccgcaaacatttatcgatatagtaggc
caggagcatatcctagcggcgctagcaaacagcttttcattgggtaggattcatcacgcc
tatcttttctctggtactcgcggtgtgggtaagactacgattggccgtcttttggctaaa
gggctaaactgccacacaggtatcactgcaaccccttgcagacaatgcgacaactgccgg
gaaatcgagcagggccgctttgtcgatttaattgaaattgatgctgcctcgcgtactaaa
gttgaagatacccgcgagctgctggataacgttcaatatattccggcacgcggccgattt
aaggtctatctgatcgacgaagtacatatgctatcctgctacagctttaatgctttactg
aaaacccttgaggaaccgccagcgcatgtcaagtttttactggctactaccaatccgcaa
aaacttccggtgactatcctgtcccgctgtctgcaattccatttaaaggctcttgacgtt
aaacaaatccgtaatcatctgtcctacgtcttgcagaaagaacagatcatggccgaacct
catgcgctacaaatgttagccagtgctgctgatggtagtatgcgagacgctctcagtcta
accgaccaagccatcgccacaggtctaggggaggtaagcgatgaagcggtcagtctaatg
ctcgggacactcaatacagagcagccgctggcgcttatcgaagcattggccgaggccgac
ggtggcgcgataatggcgacactcgcgcaatgcgctgctcgcggtatggactgggacaat
ctgcttgttgagatgctttctttactacatcgccttgcgttgggacagttagcgcctgac
cagttaaattctgaagacaacccggctagcaaactgcgtttgcgcgacctggcccggcgt
ttaccgccttccgatctgcaactatactaccaggctctaattatcggacgcaaagagctg
cctttttcaccggatccacggataggagtggaaatgactctgctgcgcgcgctggcgttt
cgtccttccgctgtagaaaaaatgaccactgtcgctagcatggaaaaaaaaacggctgaa
ttcgacgaaaacagacactgcgacagcagtgctaccggtgcgtctggcgccaaacgggca
ctgacgcaattaaagcttgataataccagacgcgccggggcaaatatagcgacgccagcg
caagacgtaccaaaatcgtcttctttttccagtggagtcaatgttggcaagcgcctgata
acggtgaagaagcaaaatacgcttactgctccggtatcaggatcgtggactgattggcag
accacgttgcctagctgtcctcagtctagctggatcgatatagataaagagcattttagg
ctaatttatactggtagcgactgtaatgatgaaaaagcagagagcgataggcaagacatc
gtgttgaagtctgaacaagaagcatctcgagcactttttttaccatcttcaagtagtgat
agtccgcttccggatgcgactacgcaatttttgcaggctcgcattgccctgttaaagtgg
caaaagattaaaaaaacaaaaaagtgcggacaggcaccggcacggcagaagactactgtt
ccttcgctagaacggccggctagtgcgagcgaacgtacgaagcagcaacacgatgacgct
ggaaagaaagagccgatgaaaaccccgcgaccggaggtgtatggttggcgtgtcactcaa
caaccagaggtagcctcgaagccggtgacgaccacgaaatcgctgcgtacagcgctagag
catgcaaaaacatcaaagttagcattgtgcttagccgaagagtcgctgacgcgcgatcct
tgggcagcgcaagtaaatcgtttggtggtgcccaaagtagcacaacaactagctttaaac
gcctggaaagaggatttggctccaggcaaaatttgtttgcacctgcgcgcctctcagcgt
catttaaattcggcttcagcgcaaagcgctctgtgcaccgcgttgagcgacgtctttggc
gcgtcgattgacttgaccatagtggaagatgataatctgacaatgaaaacgccattagaa
tggcgacaggaaatttatgaagagaagctgattcgggccaagaaagcgattttgcatgat
gctcacattcaagtgctacaaagttttttcgatgccgagctagatgaagatagcatccga
cccgtataa
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