Candidatus Doolittlea endobia: MHIR_DE00313
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Entry
MHIR_DE00313 CDS
T04480
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
den
Candidatus Doolittlea endobia
Pathway
den02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
den00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MHIR_DE00313 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
den02000
]
MHIR_DE00313 (msbA)
Enzymes [BR:
den01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
MHIR_DE00313 (msbA)
Transporters [BR:
den02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MHIR_DE00313 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
ABC_membrane_2
RsgA_GTPase
nSTAND3
AAA_16
AAA_22
AAA_29
MMR_HSR1
SLFN-g3_helicase
APS_kinase
AAA_25
AAA_18
P-loop_TraG
AAA_30
AAA_5
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
CUX96612
UniProt:
A0A143WSA5
LinkDB
All DBs
Position
I:369503..371251
Genome browser
AA seq
582 aa
AA seq
DB search
MLNDKNLSTWQTFRRLWPMISPFKAGLIVAAIALILNAASDTFMLSLLKPLLDDGFGQAN
SNILVWMPLVVIVLMVLRGVSSFISSYCVSWVSGKVVMNMRRRLFNHMMDMPASFFDQQS
IGTLLSRITYDSDQVASSSSRALITAIRESASIIGLFAMMFYYSWQLSLILMVIAPVVSL
AIRQVSKRFRQISKRMQNTMGQVSASAEQMLKGHKEVLIFGGQQVENDRFNSVSNHMRQQ
GMKMVAASSLSDPLIQFITSLALAFVLYAASFPSVMKTLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQILFSILDMATEKDEGTLEVERVKGDIAFDHVTFSYPGKETPSLH
DISLTIPAGHTVALVGRSGSGKSTIANLLTRFYDIQQCHILLDGIDLCAYKLASLRNQVA
LVSQNVHLFNDTVANNIAYARKATYSREQIENAARMAYAMDFIEKMDFGLDTVIGENGIL
LSGGQRQRIAIARALLRDCPILILDEATSALDSESERAIQKALDSLQKNRTFLIIAHRLS
TIEKADEILVIEEGRIVERGNHKKLMSHQGVYAQLHRLQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgataaaaatctttccacttggcaaactttccgtcgactttggccaatgatc
tcccctttcaaagcaggtttgatcgttgcggctatagctctgatcttaaatgctgctagc
gatacttttatgttatcactacttaagccgttattagatgacggatttggtcaagccaat
agtaacatcctagtttggatgccactagtcgtgatcgtcctaatggtactacgcggcgtc
agcagctttatttcaagctattgtgtttcctgggtttctgggaaagtagttatgaacatg
cgtcgccggctatttaatcacatgatggatatgccagcatcttttttcgatcagcaatct
atcggcacgctactttcacgcattacctatgattccgaccaggtagcctcatcctcttcc
agagcgttaattaccgccattcgtgaaagtgcatcgattattgggctgttcgcgatgatg
ttctattacagctggcaattgtcgttgattctgatggtaattgcacccgtggtatcatta
gccatccgccaggtgtcaaagaggttccgccaaatcagtaaaagaatgcagaatactatg
gggcaggtaagtgccagcgccgaacagatgcttaaaggacataaagaagtgttgattttt
ggcggacaacaagtagaaaacgatcgttttaacagcgtcagtaatcatatgcgccaacaa
gggatgaaaatggttgctgcctcttcgctttccgatccgttaatccaatttatcacgtcg
cttgcgctagctttcgtcctgtatgctgcgagctttccttcggtcatgaaaactttaact
gctggcaccatcaccgtggtgttttcgtcaatgatagccttgatgcgtcctctgaaatcc
ctaaccaatgtcaatgcgcagtttcagcgcggcatggccgcatgtcagattctcttttcc
attcttgatatggcaaccgaaaaagatgaaggcacactggaagtggaacgcgttaaaggg
gatattgcttttgaccacgttactttttcctatccgggcaaagagacgccttcactgcat
gatatcagtctcactattcccgcagggcatacagtagcgctagtaggtcgctctggatcc
ggaaaatccactattgccaatttgttaacgcgtttttatgatattcagcagtgtcatatc
ctactcgatggcattgatttatgcgcttataagcttgcttctctgcgtaatcaggtagcg
ctagtatctcaaaacgtgcatttgtttaatgacactgttgccaacaatatcgcctatgcc
cgcaaggctacttactctcgtgagcaaattgaaaacgcggcgcgcatggcctatgccatg
gatttcatcgagaaaatggactttggtctagatacagtaattggcgagaacggcatttta
ttatccggtggccagcgtcagcgcattgccatcgcgcgcgcactgctgcgggattgccct
atcttgatcctcgatgaagctacctcggcgcttgatagcgagtccgagcgagcgattcaa
aaagcgctagattcgctccagaaaaatcggactttcctgatcattgctcatcgcctatcc
accattgaaaaagccgatgaaatcttggttatagaggaagggcggatcgttgagcgcgga
aatcataagaaactgatgtcgcaccagggcgtttatgctcaacttcaccgactacagttt
ggtcaatga
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