Candidatus Doolittlea endobia: MHIR_DE00345
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Entry
MHIR_DE00345 CDS
T04480
Symbol
rsmC
Name
(GenBank) Ribosomal RNA small subunit methyltransferase C
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
den
Candidatus Doolittlea endobia
Brite
KEGG Orthology (KO) [BR:
den00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
den03009
]
MHIR_DE00345 (rsmC)
Enzymes [BR:
den01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
MHIR_DE00345 (rsmC)
Ribosome biogenesis [BR:
den03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MHIR_DE00345 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
MTS_N
Methyltransf_25
Methyltransf_12
Methyltransf_11
PrmA
Methyltransf_31
Pox_D3
Motif
Other DBs
NCBI-ProteinID:
CUX96638
UniProt:
A0A143WSE3
LinkDB
All DBs
Position
I:complement(402972..404018)
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AA seq
348 aa
AA seq
DB search
MPALTHATELLVRHQDTLSNKRVVIAGDLQDFLPIRLEARSVKVHTTWYHHYQILVNTLG
EQAVQFSSVADTELVGGCDTLIYYWPKNKLEALFQLTNLLSLLPLGCDVYVVGGNRSGVY
SAEPMLSVWCPLVKIDSARRCKLYQGKLVQQPCFNVEAFWQSYQHEDVVIKTLPGVFSRD
GLDDGSQLLLSTFNQPLHGHVANIGCGVGVLSAVLAKEAAGVQLTLSDAYAPALAASRAT
LLANGLQGKVLAGDVYSSISGHFDMIISNPPFHDGIQINLQAAEMLIRGALNHLRIYGEL
RIVANAFLPYAHLLNAVFGNYQVLAQNGRFKVYQAIHCVKHSCVKCRY
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctttaactcatgccactgaacttttagtccggcatcaagatacactttcaaat
aaacgggtcgtgattgcaggtgacttacaggattttctacctatccgcctcgaggcaaga
agtgttaaagtgcatactacctggtatcatcattaccaaattctggtgaacacgcttgga
gaacaggcggtacaattcagctcagtggctgacaccgagctggtcggcgggtgcgatacg
cttatctattactggccgaaaaacaagctagaagcgctgtttcaattaactaatctgttg
tcgctgctaccgttgggctgtgatgtgtatgtggtagggggaaatcgcagcggcgtgtat
agcgccgaacctatgctgtcagtttggtgtcctctggttaaaatcgacagcgctcggcga
tgcaagttgtatcaaggcaagcttgttcagcaaccctgtttcaatgtcgaggcgttttgg
caatcttaccaacatgaagatgtagtgatcaaaactttacctggcgttttcagccgtgac
ggactagatgatggtagtcaattgctattgtccacgtttaatcagccgcttcacggtcat
gtggctaacatcggatgcggcgtcggcgttttgtcagctgttcttgcgaaagaagcggca
ggagtacaactaacgctcagtgatgcctatgcgccagcgttggcggccagccgcgctacc
ttattagccaatgggctgcaagggaaggtactagctggcgatgtgtactcttctatcagt
ggtcacttcgatatgattatttcaaacccgccgtttcatgatggcatacaaattaatttg
caggcagctgaaatgctgattcgcggcgcgcttaaccatctgcggatctatggcgaattg
cgtattgtagctaatgcttttctaccttatgcgcatctgctcaatgctgtattcggcaat
tatcaggtgctggcgcaaaacggccgcttcaaagtgtatcaggctatccattgcgtaaaa
cacagctgcgttaaatgccgttattaa
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