Candidatus Doolittlea endobia: MHIR_DE00348
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Entry
MHIR_DE00348 CDS
T04480
Symbol
ssb
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
den
Candidatus Doolittlea endobia
Pathway
den03030
DNA replication
den03430
Mismatch repair
den03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
den00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHIR_DE00348 (ssb)
03430 Mismatch repair
MHIR_DE00348 (ssb)
03440 Homologous recombination
MHIR_DE00348 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
den03032
]
MHIR_DE00348 (ssb)
03400 DNA repair and recombination proteins [BR:
den03400
]
MHIR_DE00348 (ssb)
03029 Mitochondrial biogenesis [BR:
den03029
]
MHIR_DE00348 (ssb)
DNA replication proteins [BR:
den03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MHIR_DE00348 (ssb)
DNA repair and recombination proteins [BR:
den03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
MHIR_DE00348 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
MHIR_DE00348 (ssb)
Mitochondrial biogenesis [BR:
den03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
MHIR_DE00348 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
DUF3127
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CUX96641
UniProt:
A0A143WSR7
LinkDB
All DBs
Position
I:409114..409641
Genome browser
AA seq
175 aa
AA seq
DB search
MASRGVNKVILIGNLGQDPEVRHMPNGGAVTNMTLATSESWRDKQTGEIKEKTEWHRVVL
FGKLAEVAGEYVRKGSQVYIEGSLQTRKWQDQSGHDRYTTEIVVNIGGTMQMLGRRQDVA
VSSRSQQSGWGQPQQHHNHNSQFIGSHELASRCTQNNAPAISQEPPIDFDDDIPF
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggctagcagaggcgttaataaagtgattttaatcggcaaccttggccaggacccagaa
gttcgccatatgcctaatggtggtgcggtaaccaacatgacgctagccacgtcagaaagc
tggcgtgacaagcagaccggcgaaattaaggagaaaacggaatggcaccgcgtggtacta
tttggcaagctagccgaggtagcaggtgaatatgtgcgtaaagggtctcaagtatacatc
gaaggatcgttgcaaacccgcaaatggcaagaccaaagcggtcacgaccgttacactacc
gaaattgtggtcaatataggcggtaccatgcaaatgcttggaagacgtcaggacgtcgcg
gtgtccagtagaagccagcagagcggatggggccagcctcagcaacatcacaatcataat
tcacaattcatcggtagtcatgaattagcgtctcgctgcacacagaacaacgctccggcg
atcagccaggagccgccaatagactttgatgacgatattccgttctga
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integrated database retrieval system
