Candidatus Doolittlea endobia: MHIR_DE00471
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Entry
MHIR_DE00471 CDS
T04480
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
den
Candidatus Doolittlea endobia
Brite
KEGG Orthology (KO) [BR:
den00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
den03009
]
MHIR_DE00471 (rluD)
Enzymes [BR:
den01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
MHIR_DE00471 (rluD)
Ribosome biogenesis [BR:
den03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MHIR_DE00471 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
CUE
TruB_N
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
CUX96731
UniProt:
A0A143WT24
LinkDB
All DBs
Position
I:563664..564638
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AA seq
324 aa
AA seq
DB search
MAQYQYLTATVNTSPLGRSLMQVLSDLFPDYSRSQIKTWILNGLVRVNGQVTAVPKEKIL
GSISVEIQLRIEESPRLEAQSIPLDIVYEDNDILVINKPRDLVVHPGAGNFNGTVLNALL
HYFPPIVDVPRAGIVHRLDKDTTGLMVVAKTVLAYTRLVQALQVREITREYEAVAIGTMT
AGGTIKQPTARHAIKRKHITVHPMGKLAVTHYRVMERFRAHTRLRLRLETGRTHQIRVHM
AHIKHPLVGDPLYGGRTRPSKRASDEFNELLCNFNRQALHATLLRLCHPITLIKMEWHAP
LPQDMVTLIAALQVDAKLFKDSAN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtatcaatacctcactgcaactgtgaacacatcaccacttgggcgatcttta
atgcaggttttgtcagacttgttccctgattattcgcgatcgcaaataaaaacctggatc
cttaacggcttggtaagagtgaatggacaggttacggcagtccccaaagaaaaaatactt
ggtagtatatctgttgaaatacaattacgtatcgaagaatctccgcgtttagaagcacaa
tctataccgctagatattgtttatgaagataacgatattctcgtcattaataaaccgcgt
gatctggtcgtgcatcccggagctggtaattttaatggcactgtgttaaatgcgctgctg
cactattttccgcctattgtagatgttccacgtgcaggcatcgtgcatcgtttagataaa
gacacaaccggcctaatggtggtggctaagaccgtgctggcgtatacacgtttagtgcaa
gcgctacaggtgcgggagattacccgtgaatacgaggcagttgctatcggtaccatgaca
gctggaggcacaataaaacagccgactgcgcgccacgctattaagcggaagcacataacg
gtgcatccgatgggcaagttggcagtgacccattatcgtgtaatggaacgcttccgagct
catactcgcctgagattgcgtttagaaaccggacgaacgcatcagattcgcgtgcatatg
gcgcatatcaagcatccgcttgtgggcgatccgctctatggcggccgcacgcgaccctca
aagagagcttctgacgaattcaatgaactactgtgcaattttaatcgccaagcgctgcat
gccactctccttcgactatgtcatcccattacattgattaagatggaatggcatgcaccg
ttaccgcaggatatggttacgctgatagcagcgctacaagttgatgcaaaactattcaaa
gatagcgcgaattag
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