Candidatus Doolittlea endobia: MHIR_DE00501
Help
Entry
MHIR_DE00501 CDS
T04480
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
den
Candidatus Doolittlea endobia
Pathway
den00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
den00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MHIR_DE00501 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
den01007
]
MHIR_DE00501 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
den03016
]
MHIR_DE00501 (aspS)
03029 Mitochondrial biogenesis [BR:
den03029
]
MHIR_DE00501 (aspS)
Enzymes [BR:
den01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
MHIR_DE00501 (aspS)
Amino acid related enzymes [BR:
den01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MHIR_DE00501 (aspS)
Transfer RNA biogenesis [BR:
den03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MHIR_DE00501 (aspS)
Prokaryotic type
Other AARSs
MHIR_DE00501 (aspS)
Mitochondrial biogenesis [BR:
den03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MHIR_DE00501 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CUX96757
UniProt:
A0A143WT77
LinkDB
All DBs
Position
I:complement(601745..603544)
Genome browser
AA seq
599 aa
AA seq
DB search
MRTVYCGHLNQSYIGQEVTLCGWVNRRRDLGDLIFIDMRDREGLVQVFFDPALQDTFVRA
AELRNEFCLQLTGIVRARPDSQVNNDMATGAVEVLATALSIINRSEPLRLDSKQNNTEEQ
RLRFRYLDLRRPVMVQRLKTRARISSFVRNFMDSEGFLDIETPMLIKATPEGARYYLVPS
RIHKGKFYALPQSPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
ATQVREVMERLIRDLWREIAGFDLGTFPQITYADAMRRFGSDKPDLRNPMELVDVKDLIK
DVDLEIFSIPGNNSQSRVAALRVPAGAQLSRKQIDEYTKYSEMYGAKELPWMKINQRTAG
AAGVKGPIAKFLGPRVIEQILMRTDAADGDMIFFSADRKNVVTNVLGALRLKLGLDLQLT
VTDRWAPLWVVDFPMFEEDGEGGLSAMHHPFTAPKDIDAHTLATSPTSAVANAYDMVING
CEVGGGSVRIHCSDMQETVFSILGINEQEQKEKFGFLLDALKYGTPPHAGLAFGLDRLVM
LLTGTDNIRDVIAFPKTTTASDLMTEAPSFSNADTLSDLSITVIGKDRETTESGAYNIL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtatattgcggacatctgaaccagtcctatattggccaggaagtaacatta
tgtggttgggttaaccgccgtcgagatcttggcgatctgattttcatcgacatgcgcgat
cgggaaggcctagtgcaagtattttttgatccagctcttcaggatacctttgtgcgtgct
gccgaactgcgtaatgaattctgcctgcagttgaccggtattgtgcgtgcccgccctgac
agccaagttaataacgacatggcgaccggcgccgttgaagttttagctaccgcactttcc
atcattaatcgttctgaacctttacgtctcgatagcaagcagaataacaccgaagagcaa
cggctcagattccgttaccttgatttgcgtcgaccagttatggtgcaacgtctcaaaaca
cgggcacgtatctccagttttgttcgtaacttcatggattcagaaggttttctcgatatc
gaaacaccgatgctgatcaaggctacaccggagggtgcacgttactatctagttcccagc
cggatacataaaggtaaattctacgctttgccgcagtcgccgcaactatttaaacaatta
cttatgatatctgggttcgatcgctactaccagattgtaaaatgttttcgcgatgaagac
ttacgcgccgatcgtcaacctgagttcactcagatagacgttgaaacctcttttatgact
gcaacccaagtacgagaggtaatggagcggcttattcgcgatttatggcgtgagattgcc
ggctttgatctgggcactttccctcaaataacctatgctgatgctatgcgccgtttcggt
tcagacaagccggatttacgtaatccaatggaattagtagacgtaaaagatttgatcaag
gacgtagatttggagatattttcaattcctggtaacaacagccagagtcgcgttgcggca
ttgcgcgtacctgctggtgcgcaattgagtcgcaaacagattgacgaatatactaaatat
agtgaaatgtatggcgctaaagagctaccatggatgaagatcaaccagcgtaccgccgga
gcagcaggggtgaaaggcccaatagcgaaatttcttgggccacgagtgattgaacagatc
ctgatgcgtactgatgccgctgatggagatatgattttcttcagcgcggatcgcaaaaac
gttgtcactaatgtactaggggcattacgtctaaaactgggcctagatttgcaacttacg
gttaccgaccgctgggcgccgttatgggtcgtcgactttccgatgttcgaagaggacggg
gaaggcggtttgtccgccatgcatcatccgttcactgcacccaaggatatcgatgctcac
acgcttgccacatcgccaacgtcggcggtagccaatgcttatgacatggtgattaacggt
tgtgaggtcggcggtggctcggtacgtatccactgtagcgacatgcaggaaacggtgttt
agtattttaggtattaacgaacaagaacagaaagagaaattcggttttttactcgatgcg
ttaaaatacggcacgccgccgcatgctggtttggcctttggcctcgaccggttggtaatg
ctgctgactggtaccgataatatccgtgatgttattgcgttcccgaaaactactacagct
tcagacctgatgaccgaagcgcctagtttcagcaatgccgacacactctccgatctgtcg
attacggttatcggtaaagatcgggaaaccactgaaagtggcgcctataatatcctataa
DBGET
integrated database retrieval system
