Candidatus Doolittlea endobia: MHIR_DE00671
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Entry
MHIR_DE00671 CDS
T04480
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
den
Candidatus Doolittlea endobia
Brite
KEGG Orthology (KO) [BR:
den00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
den03016
]
MHIR_DE00671 (truB)
Enzymes [BR:
den01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MHIR_DE00671 (truB)
Transfer RNA biogenesis [BR:
den03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MHIR_DE00671 (truB)
Prokaryotic type
MHIR_DE00671 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CUX96900
UniProt:
A0A143WT88
LinkDB
All DBs
Position
I:complement(793726..794682)
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AA seq
318 aa
AA seq
DB search
MSGLSCYDVDGIILLDKPLGLSSNDLVQKVKRLFRANKAGHTGALDPLATGMLPICLGEA
TKFSQHLLESDKRYRVTARLGERTDTSDTEGKIVSVRPVSLGKARLEAALSHFRGRISQV
PSMFSALKYQGRPLYEYARKGITVKRDARSICIYDLKLHRWNLTEVELEIHCSKGTYIRT
IVDDLGERLSCGAHITALRRLTVAHYPAGRMITFAALQTIVNDAMEAPEILSLLLPVDSA
VADMPAVNLPSDLSARVRLGQTLVVSAPAQAGLVRLTEGDVGRFFGIGKITAAGRLTPCR
LIAEPRAWSRNRLAISTS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtctaagttgctatgacgttgacggtatcattcttttggataagccgcttgga
ctttcgtctaatgacttggttcaaaaggtcaagcgattgtttcgcgctaataaagccggg
cataccggtgcgctagatccgctggcaaccggtatgctacccatctgccttggcgaggcg
actaagttttctcagcatcttctagaatctgataaacgctatcgggtcaccgcccggctc
ggcgaacgcaccgacacttctgacacagagggtaaaattgtcagcgtccgtccagtatca
ctgggaaaagcacgattagaggcggctctgagccactttcgcggtagaatcagtcaggtg
ccgtcaatgttttccgcattaaagtatcaggggcgtccgctgtacgagtacgctcgcaaa
ggaatcacggtaaagcgtgatgcgcgctctatctgcatctacgatttgaagttacatcga
tggaatttaacggaggtggaactggaaattcattgttctaaaggtacttacatccgcact
atcgttgatgatttaggtgaacgtctcagctgcggcgcgcatattacggcgctacggcga
ctgacggttgcccactatcccgcagggcgtatgataacgttcgcggctctgcaaaccatt
gtcaacgacgcgatggaggcaccggaaattctgtcgctgctattgccagtagacagcgca
gtggcggatatgccggcggttaatttgccgtctgatctttcagcgagagtgcgccttgga
caaacgctagtggttagcgcgccggcacaggccggtctggtacgcctgacagagggagac
gtagggcgttttttcggaatcggaaaaatcactgcagcgggccggctgacgccgtgccgc
cttatagcggaaccgcgcgcctggtcacgcaatcgccttgcgatcagcacgagctaa
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