Dyadobacter endophyticus: ACN9ML_02480
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Entry
ACN9ML_02480 CDS
T11334
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dend Dyadobacter endophyticus
Pathway
dend03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dend00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN9ML_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dend03019
]
ACN9ML_02480
03009 Ribosome biogenesis [BR:
dend03009
]
ACN9ML_02480
Enzymes [BR:
dend01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACN9ML_02480
Messenger RNA biogenesis [BR:
dend03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACN9ML_02480
Ribosome biogenesis [BR:
dend03009
]
Prokaryotic type
rRNA helicases
ACN9ML_02480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRV40810
LinkDB
All DBs
Position
complement(617503..619278)
Genome browser
AA seq
591 aa
AA seq
DB search
MTTEIFETFEELGLNEDILKAVLEMGFTKPSPIQAQGIPAVMQGSDVIGQAQTGTGKTAA
FGIPVLERIDTSNNAVQALILCPTRELAVQVSEELGRLAKYMRGVRIEAIYGGDSIDRQI
RSLKKGVHIVVGTPGRVMDHMERKTLKFNEVRMMVLDEADEMLDMGFREDIESILADMPE
DRQTILFSATMSKPIMSITKRFLNDPVLIKVVRNELTNQNIEQVYFEVKPQAKVEVMTRL
IDMHHIKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKFKAGVTTIL
VATDVAARGIDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVARDEKYRLKS
IEGYTKVKIEKGVIPSFEDIVGVRKARFVETISTSIKESSDQELYNDVLEMLHHSGFTTE
QIVGAMAKQIMGVQKNEYADSNLAWEERRNDRREGGNERFGRGERREGGSRFEKGGDRRD
GGSRFGGDRSTDRYAPRGERGADRGERRQSAPEAGMTRLFLSLGRKDHIMPKDIVGAIAG
EANIPGKTIGAIDIYDKFTFVDVPERDARAVLRAMDGNTIKGKPVQIDIAK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaatttttgaaacattcgaagagctcggactcaacgaagacatcctgaaa
gccgtgctagaaatgggtttcactaaaccctcaccgatacaggcacagggaatccccgca
gtaatgcagggttctgacgtaattggtcaggcccagactggtaccggtaaaacggctgca
ttcggaattcccgtgctggaaagaatagatacttctaacaatgcagtacaagccctgatc
ctttgcccaacccgtgaattggcggttcaagtatccgaagaactcggccgcctggccaaa
tatatgcgtggtgtgcgcattgaagcgatctacggaggtgactcgatcgatcgtcaaatc
cgctctttgaaaaaaggagtacatatagtagtaggaactccgggccgcgtcatggaccac
atggagcgtaaaacactgaaatttaacgaagtccgcatgatggtgcttgacgaagccgac
gaaatgctcgatatgggcttccgtgaggacatcgaaagcattctggctgatatgccagaa
gatcggcagacgatccttttctcggcaaccatgtcgaagccgatcatgtcgatcaccaag
cgcttcctgaatgaccctgtattgatcaaggttgttcgtaacgagttgaccaaccagaat
atcgagcaggtttatttcgaagtgaaaccacaggcgaaagttgaagtaatgacccgtctg
atcgatatgcaccacatcaaatcccttttggtgttctgtaataccaaacgcaaggtggac
gagatcgtggaagacctgcaattgcgcggttatgcttccgaaggcatccatggtgacctg
cgccagcagcaacgcagcaacgtaatgagcaaattcaaagcaggtgttactaccattttg
gtggctaccgacgttgcggctcgcggtatcgacgttagcggcctggatggcgttatcaac
tacgacattccgatggacgaagaatattacgtacaccggatcggtcgtacgggtcgtgca
gggatgtcgggtaaggcgttctctcttgtggctcgtgacgaaaaataccgtctgaaatcc
attgaaggttacaccaaagtaaaaatcgaaaaaggcgttattccttctttcgaagatatc
gtaggtgttcgtaaagctcgttttgtagagactatttcaacctctatcaaagaaagcagc
gatcaggaactgtacaacgacgtacttgaaatgctccaccacagtggcttcacgaccgag
cagatcgtgggcgcaatggcgaaacagatcatgggcgttcagaaaaacgaatatgccgat
agcaacctcgcatgggaagagcgtcgcaacgaccgtcgcgaaggcggtaatgagcgtttc
ggaagaggcgaacgtcgtgaaggcggaagccgtttcgaaaaaggcggagaccgtcgtgac
ggtggcagccgttttggaggagaccgcagtaccgaccgctatgcaccacgtggtgagcgc
ggcgctgaccgtggagagcgtcgtcaatcggcacctgaggctggcatgacccgtttgttc
ctgagccttggccgtaaagaccacatcatgccgaaagacatcgttggcgctattgccggc
gaagcaaacatccctggcaagacgatcggtgcgatcgacatttatgacaaatttacgttc
gtagacgtgcctgagcgcgatgcacgtgcggtattgcgtgcgatggatggcaacaccatc
aaaggcaagccggtgcaaatcgatattgcaaaataa
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