Dyadobacter endophyticus: ACN9ML_16000
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Entry
ACN9ML_16000 CDS
T11334
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dend Dyadobacter endophyticus
Pathway
dend03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dend00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN9ML_16000 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dend03019
]
ACN9ML_16000 (groL)
03110 Chaperones and folding catalysts [BR:
dend03110
]
ACN9ML_16000 (groL)
03029 Mitochondrial biogenesis [BR:
dend03029
]
ACN9ML_16000 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dend04147
]
ACN9ML_16000 (groL)
Enzymes [BR:
dend01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACN9ML_16000 (groL)
Messenger RNA biogenesis [BR:
dend03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACN9ML_16000 (groL)
Chaperones and folding catalysts [BR:
dend03110
]
Heat shock proteins
HSP60 / Chaperonin
ACN9ML_16000 (groL)
Mitochondrial biogenesis [BR:
dend03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACN9ML_16000 (groL)
Exosome [BR:
dend04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACN9ML_16000 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ACN9ML_16000 (groL)
Exosomal proteins of breast cancer cells
ACN9ML_16000 (groL)
Exosomal proteins of colorectal cancer cells
ACN9ML_16000 (groL)
Exosomal proteins of bladder cancer cells
ACN9ML_16000 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XRV37274
LinkDB
All DBs
Position
4046766..4048397
Genome browser
AA seq
543 aa
AA seq
DB search
MSKKIFFDTEARDKIKRGVDTLADAVKVTLGPRGRNVVIDKKFGSPSITKDGVTVAKEID
LKDPIENMGAQLVKEVASKTADSAGDGTTTATVLAQAIYSIGVKNVAAGANPMDLKRGID
KAVSAITRDLEAQKKNISTSKEIAQVATISANHDEEIGQMIAEAMEKVGKEGVITVEEAR
GTETEVKTVEGMQFDRGYLSPYFVTNTEKMEAELERPFILISEKKVSSMKELLPVLEAVA
QTGRPLLILAEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAIITGGTVI
SEERGFKLENATLDYLGTCEKAIIDKDNTTLVNGSGASEDIQARVNQIKAQIENTTSDYD
REKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFIR
ATAALEGVVGLNEDEKTGINIIRVALEAPLRTIVSNSGQEPSVVVQKVKEGTGAYGYNAK
DNTYGDLLEAGIIDPKKVSRLALENAASIAGLLLTTECVIADEPEEAPAAGGHSHGGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaaaatattttttgacacagaagcacgcgataagatcaaacgcggtgtggac
accctggctgacgccgttaaagttacattgggaccccgcggtcgtaacgttgtaatcgac
aagaaattcggttctccaagcatcaccaaagatggtgttactgttgccaaagaaatcgat
ctgaaagatcctatcgaaaacatgggagctcagttggtgaaagaagtagcatccaaaact
gctgactcagctggtgatggtactacaactgctaccgtgcttgcacaggcgatctactcg
atcggtgtgaaaaacgtagccgccggtgctaatccgatggacctgaaacgcggtatcgac
aaagcggtttcagcgatcacgagagatctggaagctcagaaaaaaaatatctctacctcc
aaagaaatcgctcaggttgctactatttctgcaaaccatgacgaggagatcggtcaaatg
atcgctgaggcaatggagaaagttggtaaagaaggtgtgatcaccgttgaagaagcacgc
ggaactgaaacagaagttaaaactgtggaaggtatgcagttcgaccgtggttacctgtct
ccatacttcgtaaccaacaccgagaaaatggaagccgaactggagcgtccgtttatcctc
atctctgagaagaaagtttcttctatgaaagaacttcttccggtattggaagcagttgca
caaaccggccgtcctttgcttatccttgcagaagatgttgacggagaagcacttgctaca
ttggtagtaaacaaaatccgtggtgcattgaaagtagctgctgttaaagcgcctggtttc
ggtgaccgtcgtaaagcaatgctggaagatatcgctatcatcactggcggtacagttatc
agcgaagagcgtggtttcaaattggaaaacgctacgcttgactacctcggtacttgcgaa
aaagcgattatcgacaaagacaacaccactttggttaacggtagcggtgcatctgaggat
attcaggcacgtgtaaaccagatcaaagcgcagatcgaaaacactacatctgattacgat
cgcgaaaaacttcaggagcgtctggcgaaactgtcaggcggtgtagcgatcctttacatc
ggtgctgctactgaggttgaaatgaaagagaaaaaagaccgcgttgatgacgcccttcac
gcaacacgtgctgcggttgaagaaggtatcgttgcaggtggtggtgtagcgttcattcgt
gcaacagctgctcttgaaggcgttgtaggcttaaacgaagacgaaaagaccggtatcaat
atcatccgtgttgctttggaagctccgttgagaactatcgtttccaactcaggccaggag
ccatccgtagtagttcaaaaggttaaggaaggaactggcgcttacggatacaacgcgaaa
gacaatacctacggagatcttctcgaagcaggtatcatcgatcctaagaaagtatcccgt
ttggctcttgaaaacgcggcatctatcgcgggtctgttgcttacaacagaatgcgttatc
gctgacgaaccagaagaagctcctgcggcaggtggccacagccacggcggcggaatgggt
ggcatgatgtaa
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