Dyadobacter endophyticus: ACN9ML_25235
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Entry
ACN9ML_25235 CDS
T11334
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
dend Dyadobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
dend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dend03400
]
ACN9ML_25235
DNA repair and recombination proteins [BR:
dend03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
ACN9ML_25235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_16
ResIII
AAA_30
Zeta_toxin
T2SSE
AAA_19
PDXDC1-like_cen
Epsilon_antitox
Motif
Other DBs
NCBI-ProteinID:
XRV39045
LinkDB
All DBs
Position
complement(6173985..6175550)
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AA seq
521 aa
AA seq
DB search
MSKKEQFIAAIQKSYQTDKPVIHLGSAILDGEIIGEARVNLPLRMMNRHGLVAGATGSGK
TRTLQVFAEQLSAAGVPVFMSDIKGDLSGIAQPGKTNAALEERAQILGTVFEPKGFPVEL
YSLSGNKGAQMRATVLEFGPILLSKIFELNETQAGVLAILFKYADDKDLPMVDLNDLKKV
LNYLAEGPGADEIKADYGTISASTAGTILRKIVALEQQGVGTIFGERSFDISDLINKVDG
QGVISLLNVSDVQDRPALFSTFMLSLLAELYHKLPEAGDLDKPKLVFFLDEAHLLFKDAP
KAFLEQIEQVVRLIRSKGVGIFFCTQMAQDVPVSVLGQLGNRVQHVLRAFTPQDAEGLKQ
TVKTYPKSDFYTIDQLLTTLGIGQALITVLNEKGIPTEVAATHLMPPTSIMGPMVQADYD
KHVQQSDVYTKYKDPIDPESAYEILTKRMEEHARVETEAKEAEVQAKVEAKKEKEQTSMI
SDALNSPLAKQIGREVVRGVFGMLFGKKTTTRKSGGGLFGF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagaaagaacaatttattgcagcaattcagaaatcctatcaaactgacaaacct
gtaattcatttggggtcggccatactcgacggcgagattatcggcgaggcccgcgtaaac
cttcccttgcgcatgatgaaccgccacggactggtagccggagctacgggatcggggaaa
acgcgtacgctgcaggtattcgccgaacagctttcagcagcaggtgtgcccgttttcatg
tccgacattaagggcgacctttcgggtattgcacagccaggcaaaacgaatgcagccctg
gaagaacgcgcacaaatactgggaaccgttttcgagccgaaaggatttcctgtcgagcta
tattcgctgagcggcaacaaaggcgcacaaatgcgtgctacggtgctggaattcgggccg
atattgctttccaaaatcttcgaactgaacgaaacccaggccggcgtgctcgctatcctg
ttcaaatatgccgacgacaaggacctcccgatggtggacctgaacgacctgaaaaaagtc
ctcaactacctcgccgaaggcccgggcgccgatgaaatcaaagccgattacggtaccatt
tccgcgtccacagccggcacgatcctgcgtaaaatcgtcgcattggaacaacaaggcgtg
ggtaccattttcggagaacggtcattcgacatttccgacctgatcaacaaagtcgacggc
cagggcgtgatcagcctcctcaacgtctccgatgtgcaggacaggcccgcattgttctcg
acattcatgctgagccttctggctgaattataccataaactgcccgaagcgggggatctg
gacaaacctaaactggttttcttcctcgacgaagcgcatttgcttttcaaagacgcccca
aaagcctttctagaacagatcgagcaagttgtaaggctcatccgttccaaaggcgtgggt
attttcttctgcacgcaaatggcgcaggacgtgccggtatcggtgctcggccagttgggt
aaccgcgtgcagcacgtgctccgcgcatttacgccgcaggatgccgagggattgaaacag
acggtcaaaacttaccctaaatcggatttctatacgatcgatcagctcctgaccacgctc
ggtatcggccaggcattgattacggttttgaatgaaaaaggtatccctaccgaagtagcc
gccacgcatttaatgccgcccacttctattatggggccaatggtgcaggccgactacgac
aagcacgtgcagcagtcggatgtttataccaaatacaaagaccctatcgaccctgaaagc
gcctatgaaatcctgaccaaaagaatggaggaacacgcacgcgtagaaacagaggcgaag
gaagcggaagtacaggcgaaagtggaggccaaaaaggagaaagaacaaacgagcatgatc
tccgacgcgctcaactcgccattagcaaaacaaatcggccgtgaagtagtacgtggcgtt
tttggaatgctgtttggcaagaaaacgaccacgcggaaaagtggcggggggttgtttggg
ttttaa
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