Dyadobacter endophyticus: ACN9ML_28095
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Entry
ACN9ML_28095 CDS
T11334
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dend Dyadobacter endophyticus
Brite
KEGG Orthology (KO) [BR:
dend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dend03032
]
ACN9ML_28095 (gyrB)
03400 DNA repair and recombination proteins [BR:
dend03400
]
ACN9ML_28095 (gyrB)
Enzymes [BR:
dend01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACN9ML_28095 (gyrB)
DNA replication proteins [BR:
dend03032
]
Prokaryotic type
DNA Topoisomerases
ACN9ML_28095 (gyrB)
DNA repair and recombination proteins [BR:
dend03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACN9ML_28095 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XRV39604
LinkDB
All DBs
Position
6904395..6906350
Genome browser
AA seq
651 aa
AA seq
DB search
MSNEAVLEVNSYSAENIQVLEGLEAVRKRPAMYIGDTGFKGVHHLIWEVVDNSIDEAMAG
YCDTINVTIEKNNSITVKDNGRGIPTGMHPKENKSALEVVLTVLHAGGKFDKDTYKVSGG
LHGVGVSCVNALSIHLRAEVHREGKIFEQEFSEGKPLYSTRVIGDSDKTGTIIHFLPDAT
IFTVTEFKYETVATRLRELSYLNKGIRISLEDKREEDEDGKFRGEDFYSEVGLNEFVTYL
DATRQPLIPEPIHMESDKGAIPVEVAMMYNTSYSENVFSYVNNINTIEGGTHVSGFRAAL
TRTLKNYAEKSGVLTKEKIEISGDDFREGLTAVISIKVQEPQFEGQTKTKLGNSEVTGAV
SQVVSEMLDTYLDEHPKEARVIIDKVILAAKARIAAKKAREMVQRKNILTGTGLPGKLSD
CSETDPNVCELYLVEGDSAGGTAKQGRNRAYQAILPLRGKILNVEKAQEYRIYENEEIKN
MFTAMGVQIGKDGDERALNIDKLRYHKIVIMTDADIDGSHIRTLILTFFFRYMKILIDNG
YIYIAQPPLYLVKKGKEERYCWTEQQREEAVREISGGKEDSVNVQRYKGLGEMNAEQLWE
TTMNPEHRSLKQVSVESAAEADHLFSMLMGDEVAPRRDFIEKNAKYARVDV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgaagcagtgctagaagtaaacagctattcggctgaaaatatccaggttctt
gaaggtttagaggccgttcgtaaacgtccggcgatgtatatcggtgacactggcttcaaa
ggggtgcaccacttgatttgggaggttgttgacaactccattgatgaggcgatggcaggt
tactgcgataccatcaatgttacgatagaaaaaaataattccatcaccgttaaagacaac
ggtcgcggtatccccaccggaatgcaccccaaagagaataaatctgctttggaggttgta
ctgacagttctccacgccggtggtaaatttgacaaagatacttataaggtttctggtggt
ttgcacggggtaggggtatcctgcgtgaacgcgctatcgatccatctgcgcgccgaagta
caccgcgaaggtaaaatattcgaacaggaattcagcgaaggcaaaccgctttactccacc
cgcgtgatcggtgattcggacaagacgggaacgatcatccacttcctgcccgatgcgacg
atcttcacggtaaccgaatttaaatacgaaacggtagccacccgcttgcgcgagttgtcc
tacctgaacaagggaatccgcatttcactggaagataagcgtgaggaagacgaagatggt
aaattccgcggcgaagacttctattccgaagtaggtctgaacgaattcgtgacttacctc
gacgctacccgccagccattgatccccgagccgatccacatggaaagcgataaaggcgct
atcccggtggaagtggcgatgatgtacaacacctcgtacagcgagaacgtgttctcctat
gtgaacaatatcaacaccatcgaaggtggtacccacgtttcgggtttccgcgccgcattg
acgcgtacgctgaaaaactacgccgagaaatcgggtgtcctgacaaaggaaaaaatagag
ataagcggggatgacttccgtgaagggcttaccgcggtgatctcgatcaaagttcaggaa
cctcagtttgaaggccagaccaaaacgaagcttggaaacagcgaagtaacaggtgccgtg
agccaggtggtgtcggaaatgctcgatacgtatctggacgagcacccgaaagaagcccgt
gtaattatcgacaaggtaatccttgccgcgaaagcccgtatcgctgcgaaaaaagcgcgc
gaaatggtacagcgcaagaacatccttacgggtacaggtttgccaggaaagctgtccgac
tgctccgaaaccgatccgaacgtctgcgaattgtaccttgtcgaaggggattccgcgggt
ggaacggccaagcaaggacgtaaccgtgcttaccaggcgatccttcctttgcgtggtaag
atcctgaacgtggaaaaggcgcaggaataccgcatttatgaaaatgaagagatcaagaac
atgttcaccgcaatgggcgtgcagatcggtaaggacggcgacgagcgtgcattgaatatc
gacaagctccgttaccacaagatcgtaatcatgaccgatgcggatatcgacggtagtcac
atccgtacactgatcctgactttcttcttccgctatatgaagatcctgatcgacaatggc
tatatctacatcgcccagccgccgctgtacctcgtgaaaaagggcaaggaagagcgttac
tgctggaccgagcaacaacgcgaagaagcggttcgtgaaatctcgggtggtaaggaagac
tcggtgaacgtacagcgttacaaaggtcttggtgaaatgaatgctgagcagctctgggaa
acaaccatgaatcccgagcacagaagcttgaaacaggtttctgtagaatcagcggccgag
gcggatcacctgttctcgatgctgatgggcgacgaagtagctcctcgccgcgattttatc
gagaaaaacgccaagtatgcccgtgtggacgtgtag
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