Dyadobacter endophyticus: ACN9ML_28620
Help
Entry
ACN9ML_28620 CDS
T11334
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dend Dyadobacter endophyticus
Pathway
dend00300
Lysine biosynthesis
dend00470
D-Amino acid metabolism
dend01100
Metabolic pathways
dend01110
Biosynthesis of secondary metabolites
dend01120
Microbial metabolism in diverse environments
dend01230
Biosynthesis of amino acids
Module
dend_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dend00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACN9ML_28620 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACN9ML_28620 (dapF)
Enzymes [BR:
dend01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACN9ML_28620 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XRV39706
LinkDB
All DBs
Position
7021999..7022778
Genome browser
AA seq
259 aa
AA seq
DB search
MSIAFYKYQGTGNDFVMVDDRNLQFPVSKELIASICHRRFGVGSDGLILLQNAEGYDFRM
VYFNADGGEGSMCGNGGRCVVRFANDLGLFKDSTKFIAVDGEHEATVSGDTIRLKMSNVK
GVEQYEAYDFMNTGSPHYVTYVDDIHEADVVAVGSEIRYGSVYGPKGGTNVNFVEVIEDN
HLSVRTYERGVEDETFSCGTGVTACALSAHIREGWEGPVQVETIGGTLSVEYQTAGEGQF
NDIYLIGPAVRVFEGTLNV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgcgttttataaataccagggcaccggaaacgacttcgtaatggtggacgac
cgcaacttgcaattcccggtttcaaaagagttgatcgcgtcgatctgccaccgccggttc
ggggtggggtccgatggccttattcttctgcaaaatgcagagggctacgactttcgcatg
gtgtatttcaatgccgatggtggcgaaggcagtatgtgcgggaatggtggccgctgcgtg
gtgcgttttgcgaatgaccttgggctgtttaaggacagcactaaattcatagcggtcgac
ggcgagcatgaggcaacggtttcgggtgatacgatccgcctcaaaatgtcgaatgtgaaa
ggcgtggagcaatatgaggcgtatgatttcatgaataccggttcgccgcattatgtgact
tatgtggacgatatccacgaagccgacgtcgtggctgttggtagcgagatcagatacggc
tcagtatacggtcccaaaggcggtaccaatgtgaactttgtggaagtgatcgaagacaat
cacctgagcgtgcgtacctacgagcgcggtgtggaggatgaaactttctcctgcggaacg
ggcgtaacagcctgcgcgctgtccgcgcatatccgcgaaggttgggaaggcccggtgcag
gtggagaccatcggcggtacgctgtctgttgagtaccagacggccggagaagggcaattt
aatgatatttacctgatagggcccgcagtgcgcgtttttgaaggtacactaaatgtctag
DBGET
integrated database retrieval system