Denitratisoma sp. DHT3: B9N43_00620
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Entry
B9N43_00620 CDS
T10559
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
deni Denitratisoma sp. DHT3
Pathway
deni02010
ABC transporters
deni03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
B9N43_00620
03070 Bacterial secretion system
B9N43_00620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deni02000
]
B9N43_00620
02044 Secretion system [BR:
deni02044
]
B9N43_00620
Transporters [BR:
deni02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
B9N43_00620
Secretion system [BR:
deni02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
B9N43_00620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_29
AAA_22
NB-ARC
AAA_18
MeaB
AAA_30
DUF87
PRK
Nairovirus_Gn
Motif
Other DBs
NCBI-ProteinID:
QDX79885
LinkDB
All DBs
Position
112842..115013
Genome browser
AA seq
723 aa
AA seq
DB search
MESPSLTAIPTPEDAASASVPPSVDTGLLGLVMLAHFHGIAADPDQLSHEFKDDGKSLDT
SRILLAAKKLGLKARLVHVAPDRLVRTPLPALAVDLEGNYLILARADVEQVLIQIPGAPR
PEVLSVEGFVARWSGQLILFASRASMAGELSRFDFTWFIPAVVKYRHLLSEVLLVSFVLQ
LFALVTPLFFQVVMDKVLVHRGFTTLDVIAVGLLVVSIFEVVLSGLRSYVFAHTTSRIDV
ELGARLFRHLLNLPLAYFQARRVGDTVARVRELENIRSFLTGNAITIVLDLFFSVVFIGV
MLWYSGWLTLVVVLSLPCYALLSIFVTPLLRARLHEKFKRNAENQAFLVEAVNGIDTLKA
MAVEPQMTRRWDNQLAAYVAASFKTNTLGTLAHEGVNLIGKLVTIITMWLGARLVISGDL
TVGQLIAFNMLAGRVAQPVIRLAQLWTDFQQTGISVQRLGDILNNRTEVGNANRSTLPAL
VGRVEFDQVGFRYRPDAPEVLRGISLVVEPGEVIGIVGRSGSGKSTLTKLVQRLYLPERG
RVLVDGVDLAMTDTSSLRRQIGVVLQENMLFNRSIRENIALTDPGLPIEAVIQAAKLAGA
HEFILELTEGYDTLVGEHGSTLSGGQRQRIAIARALIGNPRILIFDEATSALDYESERII
QQNMKAICRGRTVLIIAHRLSAVRDASRILVMDRGQIVEQGTHSELLAHEAGHYSRLYRL
QYA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaatccccttccctcaccgcaattcccacgccggaagatgccgcttccgctagcgtt
cccccatccgtagacaccgggctcctcggcctggtcatgctggcccattttcacggcatt
gccgccgacccggatcaactgtctcatgaattcaaggatgacggtaagtcgctggatacc
tcccgtattcttcttgccgccaagaaactcggcctcaaggcccggctggttcatgttgcg
cctgatcgtctggttcgcacgccgcttcctgccttggcggtggatctggaaggcaactac
ctcatccttgcccgggccgatgttgaacaagtgctgatccagattcccggcgcgccccgc
ccagaggttctgagtgttgagggttttgttgcacgctggagcggccaactcatcctcttt
gcctcgcgggcttccatggctggcgaactctccaggttcgacttcacctggttcatcccc
gccgttgtcaagtaccgccacctattgagcgaagtgctcctggtttccttcgtcctccag
ctctttgccctcgtgacccccttgtttttccaggtcgtcatggacaaggtcctggtgcat
cgcggcttcaccacccttgacgtcatcgccgttggcctgctggtcgtctctatcttcgag
gtggttctctccggcctgcgctcctacgtcttcgcccacacgaccagccggatcgacgtg
gagcttggtgcccggctctttcgtcacctgctcaacctgcccctggcctacttccaggcc
cgccgcgtcggggatacggtcgcccgggtccgggaactggagaacatccgctccttcctc
accggtaacgccatcacgatcgttctggatcttttcttttcggtggtcttcatcggcgtc
atgctctggtacagcggctggctgaccttggtggtggtcttgtccctgccttgctacgcg
ctgctgtcgatcttcgttacgcccctgctccgggcacgtctccacgagaagttcaagcgc
aacgccgagaatcaggccttcctggtggaggcggtcaatggcatcgacaccctgaaagcc
atggccgtcgaaccccagatgacccgccgttgggacaaccaactggccgcctatgtggcc
gccagcttcaagaccaacaccttgggcaccctggcccatgagggcgtgaacctgatcggc
aagctggtcaccatcatcaccatgtggctgggagcccgtctggtgatcagtggcgacctg
accgtgggccagttgatcgccttcaacatgctcgccggccgggtggcacagcccgtcatt
cggctggcccagctttggaccgacttccagcaaaccggcatctcggtccagcgcctgggc
gacatcctcaacaaccggaccgaagtgggcaatgccaaccgaagcactttgccagccctg
gtgggtcgggtggagttcgatcaggtgggtttccgctatcgccccgacgcccccgaagtc
ctgcgggggatcagtctcgtggtggaaccgggggaggtcatcggcatcgtcggccgatcc
ggttccggcaaaagtaccctcaccaagctggtccaacgcctctatctgcccgagcggggc
cgggtcttggtggacggggtggacctggccatgaccgatacttccagcctgcgccgacag
atcggggtcgtgctccaggagaacatgctgttcaaccgctccatccgagagaacatcgcc
ctcaccgacccgggcttgcccatcgaagcggtgatccaggccgccaagcttgccggcgcc
cacgaatttattctggaattgaccgagggctacgacaccctggtcggggagcatggttcc
accctctccggcggccaacggcaacggatcgccatcgcacgggctttgatcggcaatccc
cgcatcctgattttcgatgaagccaccagcgccctggactatgaatcggagcggatcatc
caacagaacatgaaggcgatctgccgagggcggacggtgctgatcattgcccaccgactt
tcggcggtgcgggacgccagccgcatcctggtcatggatcgagggcagatcgtggaacag
ggcactcacagtgaactcctggcccatgaggccggccactactcccggctgtatcgcctg
cagtacgcatga
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