Denitratisoma sp. DHT3: B9N43_03410
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Entry
B9N43_03410 CDS
T10559
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
deni Denitratisoma sp. DHT3
Pathway
deni03018
RNA degradation
Brite
Enzymes [BR:
deni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B9N43_03410
Messenger RNA biogenesis [BR:
deni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B9N43_03410
Ribosome biogenesis [BR:
deni03009
]
Prokaryotic type
rRNA processing factors
B9N43_03410
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDX80391
UniProt:
A0A518U6T5
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All DBs
Position
complement(751877..754681)
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AA seq
934 aa
AA seq
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MKRMLFNATQAEELRVAIVDGQKLIDLDIESANKEQRKSNIYKAVITRIEPSLEAAFVDY
GADRHGFLPFKEVSRAYFKADMEPGRARIQDALKVGQELIVQVEKDERGNKGAALTTFVS
LAGRYLVLMPNNPRGGGVSRRVEGEERQELREIMDQLEVPGGMSLIARTAGIGRGLEELQ
WDLNYLLQLWRAIEGAAQGQSGAFLIYQESSLVIRAIRDYFQPDIGEILIDTDDIFEQAQ
QFMAHVMPATVNRVKRYHDDVPLFSRFQIEHQIESAYSRQVNLPSGGAIVIDHTEALVSV
DVNSGRATKGSDIEETAFRTNCEAADEIARQLRLRDLGGLIVIDFIDMESSKNQREVENR
LRDALHHDRARVQTGKISRFGLLELSRQRLRPALAETSYITCPRCTGTGHIRSTESAALH
ILRILEEEAMKENTGAIHCQVPVDVGTFLLNEKRSDIARIEMRHRASLLIVPNRHLETPQ
HEIVRLRHDQLNQEDVVLASYQMVDKPSEEGYRSPAAQAEAKSSPKQEAVVKGITPEQPA
PIVEPKAAARATPASKPQQGLLARIIAWLTGGTEEPQPVAEKKSEKSGRRERGERGERGE
RGGRDRNGRGRREGKENREERQPREGGERKERGERPKREESQPEGTREPRRQRGERGEKA
ERGETAERPEKAERGERREERQPRPPRAEQPPKAETPAGTPAEGASAVEEGETRRRGRRG
GRGRGERRGEEAAPQEAVVAAVDTAQPKTEAIAEVIEAVEAVEAAETPQAPAVTEAEVTQ
PAPPPAAPVAVSEAATVEVAEAAAPATPAVPETPAEPPAPVAPVVEPSAPAASPAVEPPV
PAEPVPAAATAIPQTESVAVPEPEPVAPEPEQPAPAKPELAAPANLEQVGLVMIETSAHR
SAPAPVSAAQPLGRKPKPVPVVAEEPLQMVETRH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgctattcaatgcgacgcaggccgaggaactccgcgtcgcgatcgtcgat
ggtcagaaactgatcgacctcgacatcgagtcggccaacaaggagcaacgcaagagcaac
atctacaaggcggtgatcacccgcatcgagcccagcctcgaagcggccttcgtcgattac
ggcgccgaccgccacggcttcctgccgttcaaggaagtctcccgcgcctatttcaaggcc
gacatggaacccggccgcgcccgcatccaggacgccctgaaagtcggccaggaactgatc
gtccaggtggaaaaggacgaacgcggcaacaagggcgcggccctgaccaccttcgtctcc
ctggctggccgctatctggtcctgatgcccaacaacccacgcggcggcggcgtctcgcgc
cgcgtcgagggcgaggagcgccaggaactgcgagagatcatggaccagctggaagtgccc
ggcggcatgagcctgatcgcccgcaccgcaggcatcggccgcggcctggaagaactccag
tgggacctcaactacctgctgcaactctggcgcgccatcgagggcgccgcccagggccag
tccggcgccttcctgatctaccaggagtcgagcctggtgatccgcgccatccgcgactac
ttccagcccgatatcggcgaaatcctgatcgacaccgacgacatcttcgagcaggcccag
cagttcatggcccacgtgatgccggccaccgtgaatcgagtcaagcgctaccacgacgac
gtgccgctgttctcgcgcttccagatcgagcaccagatcgagtcggcctactcgcgccaa
gtgaacctgccttccggtggcgccatcgtcatcgatcacaccgaagcgctggtctcggtg
gacgtgaactccggccgcgccaccaagggttccgacatcgaggaaaccgccttccgcacc
aactgcgaggccgccgacgagatcgcccgccagctgcgcctgcgcgacctgggcggcctg
atcgtgatcgacttcatcgacatggaaagcagcaagaaccagcgcgaagtcgaaaaccgt
ctgcgcgacgccctgcaccatgaccgcgcccgggtccagaccggcaagatcagccgcttc
ggcctgctcgaactgtcgcgtcagcgtctgcgccccgccctggccgagaccagctacatc
acctgcccgcgctgcaccggcaccggccacatccgttccaccgaatccgccgccctgcac
atcctgcgcatcctcgaagaagaggcgatgaaggagaacaccggcgccatccactgccag
gtgccggtggatgtcggcaccttcctgctcaacgagaagcgcagcgacatcgcccgcatc
gagatgcgccatcgcgccagcctgctgatcgtccccaaccgccacctggaaacgccgcag
cacgaaatcgtgcgcctgcgccacgaccagttgaaccaggaagacgtggtgctggccagc
taccagatggtcgataaacccagcgaagagggatatcgctcccccgccgcccaggccgaa
gccaagtcttcgcccaagcaggaggccgtggtcaagggcatcacgcccgaacagccggcg
cccatcgtcgaacccaaggcggcggcgcgggcaacgcccgcgagcaagccgcagcagggc
ctgctcgccaggatcatcgcctggctcaccggtggcacggaagaaccgcagcccgtggcg
gagaagaaatccgagaagtcgggccgccgcgagcggggagaacgtggtgagcgcggcgaa
cgtggcgggcgggaccgaaacggacgcggccgccgggaaggcaaggaaaatcgcgaggag
cgccagccgcgcgaaggcggcgaacgcaaggaacgcggcgagcggcccaagcgtgaggaa
agccagcctgaaggaacacgcgagccccggcgccagcgtggcgaacgcggagaaaaagcc
gagcgtggcgaaaccgccgagcgcccggaaaaggccgagcgtggcgagcgccgcgaagag
cgccagccgcggccgccccgtgccgaacagccacccaaggctgagacgccggcaggcacg
cctgccgaaggcgcctccgccgtcgaagagggtgaaacccgccgtcgtggccgccgcggc
ggtcgtggtcgcggcgagcgccgcggcgaggaggcagcgccccaggaagccgtggtcgcc
gctgttgacacggctcagccaaagaccgaggcgatcgccgaggtgatcgaagcggtcgag
gcggtcgaggcggcggaaacgccccaggcacccgcagtgaccgaagccgaagtgactcag
ccggccccgccgcccgccgcacccgtggcggtgagcgaagccgccacggtcgaagtggcg
gaggccgcagcacctgcgacccctgccgtacccgagacgcccgccgagcctcccgccccg
gtcgctcctgtggtcgagccttctgctccggccgcttctcccgcagtcgaaccccctgtc
ccggccgagcccgtgccggctgcggccaccgccattccgcagacggagtccgttgccgta
ccggaaccggaacccgttgcgccggaacccgagcagccggcgccagccaagcccgagttg
gcggctcccgccaatctggagcaggtcgggctggtgatgatcgaaaccagtgcccaccgc
tcggcgccggcgcccgtatccgctgcccagcctctgggacgcaagcccaagcccgtgccg
gtcgtggccgaggaaccgctgcagatggtggaaacccgccactga
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