Denitratisoma sp. DHT3: B9N43_03680
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Entry
B9N43_03680 CDS
T10559
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
deni Denitratisoma sp. DHT3
Pathway
deni03030
DNA replication
deni03430
Mismatch repair
deni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B9N43_03680 (holB)
03430 Mismatch repair
B9N43_03680 (holB)
03440 Homologous recombination
B9N43_03680 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deni03032
]
B9N43_03680 (holB)
03400 DNA repair and recombination proteins [BR:
deni03400
]
B9N43_03680 (holB)
Enzymes [BR:
deni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B9N43_03680 (holB)
DNA replication proteins [BR:
deni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B9N43_03680 (holB)
DNA repair and recombination proteins [BR:
deni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B9N43_03680 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
AAA_25
RNA_helicase
AAA_22
AAA_5
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QDX80438
LinkDB
All DBs
Position
803446..804501
Genome browser
AA seq
351 aa
AA seq
DB search
MSNLIKSNILPWHVTQWDSLLANSANLPHALLLAGPGGIGKSGFAQALAARLLCESPEDN
RACGRCEACHWLATGNHPDFRKVTLEVDEPEGEEGATGKTSAKKTAPATQIKVDQIRALE
DFIFIGSHRNGNRVVIVDPADAMNTAAANSILKILEEPPASVYFIMVSSKWRNLLPTLRS
RCRKVLFGTPAAAEAAAWLKQAGVADAESELALAGGAPLKAKLRSERGAKDSTTQILAPM
DKLPLDPLALAAHWDAQLRANSDLTLEILVDTVQKWLYDLIRVNAAASPRYLSSKASQVA
RIAGNADPIRLQRCHASLLKIRATARHPLNTMLFLEDLAARCAVAVTPNRN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaatttaattaaaagtaatattcttccgtggcatgtaacgcaatgggactcccta
cttgccaactctgccaatctgccccatgccctgctgttggcgggtcccggcggcatcggt
aaaagcggctttgcccaagcgctggcggcccgtcttctatgcgaatctcccgaggacaac
cgcgcctgcggccgatgcgaagcctgccactggcttgcgacaggaaatcatcccgacttt
cgcaaagtgacactggaagtcgatgagcccgaaggcgaggagggtgcaaccggcaaaacc
tccgcgaaaaaaacggcacctgccacccagatcaaggtcgaccagattcgagccctggaa
gatttcatattcatcggcagccaccgcaacggcaaccgggtagtgattgtcgatccagct
gatgcgatgaatacggcagcggccaattcaattctcaagatacttgaagaacctccggca
tctgtttatttcataatggtttcatccaagtggagaaaccttctgccaaccttgcgcagc
cgctgtcgcaaggtgcttttcggtactcctgcagctgccgaggcggccgcctggctgaag
caggccggggttgccgatgccgaatcggaactcgcgttggcaggcggcgcccccctgaaa
gccaagctgcgcagcgagcggggcgccaaggacagcaccacgcagattctggcacccatg
gacaaactgccattggaccctttggccctcgccgctcattgggatgcgcaattgcgggcc
aattccgatctgacgctcgagattctggtggatacggtgcagaaatggctctacgacctg
atccgggtcaatgccgccgcatcgccgcgctacctttccagcaaggccagccaggtcgct
cggatcgctggtaatgccgacccgatccggctccagcgttgccatgccagtctgctgaaa
attcgtgcgacggcgcgacaccctctgaacaccatgctgtttctggaggatctggcggcc
cgttgcgcagtcgccgtgacgccgaacagaaactga
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