Denitratisoma sp. DHT3: B9N43_03770
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Entry
B9N43_03770 CDS
T10559
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
deni Denitratisoma sp. DHT3
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
deni03009
]
B9N43_03770
Enzymes [BR:
deni01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B9N43_03770
Ribosome biogenesis [BR:
deni03009
]
Prokaryotic type
ribosomal protein modification factors
B9N43_03770
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QDX80450
UniProt:
A0A518U6Y8
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Position
complement(816578..817915)
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AA seq
445 aa
AA seq
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MAKQKQTKPPTVGFVSLGCPKASSDAEQILTRLRAEGYEISGSYDGADLVVVNTCGFIDA
AVEESLDAIGEALAENGKVVVTGCLGAKGDVVRQHHPQVLAVTGPHATQEVMAAIHAELP
PLHDPFVDLVPAQGIRLTPDHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPLGEVMQEAE
NLARAGVKELLVISQDTSAYGVDVKYRTGFWGGRPVKTRLLELCRALGELGVWVRLHYVY
PYPNVDDLIPLMAEGKILPYLDVPFQHASPRILKLMKRPASAEKVLDRIQAWRRAVPDLT
IRSTFITGFPGETEAEFNELLDFLDEARIDRVGAFAYSAVEGATANELPNPVPEALREER
RLRLMQHQEDISTQRLERRIGQRIRVLVDDIDEEGAIARSEGDAPEIDGLVYVTDGHELE
IGEFAEVTVRDCDVHDLYASIATEE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagaaacagacgaaaccgcccaccgtgggtttcgtatccctcggctgtccc
aaggcttcgtcggacgccgagcagatcctgacccggctgcgtgccgaaggttacgagatc
tcgggcagctacgatggcgccgatctggtggtggtgaatacctgcggcttcatcgatgcg
gcggtggaagagtcgctggacgccattggcgaggccctggccgagaacggcaaggtggtg
gtgaccggctgtttgggcgccaagggcgatgtggtgcgccagcatcatccgcaggtgctg
gcggtcaccggccctcacgccacccaggaggtgatggcggccatccatgccgaactgccg
ccgctgcacgaccccttcgtcgacctggtgccggcccagggcatccgcctgacgccggac
cattacgcctatctgaagatatccgaaggctgcaatcatcgctgcagcttctgcatcatt
ccctcgttgcgcggtgatctggtcagccgccccctcggcgaagtgatgcaggaagccgag
aacctggcccgcgcgggcgtcaaggaactgctggtgatctcgcaggacaccagcgcctac
ggcgtggatgtcaaatatcgcaccggcttctggggcgggcgcccggtcaagacgcggctg
ctggagctgtgtcgggcgctgggcgagttgggcgtctgggtacggctgcactacgtctat
ccctatcccaatgtggatgacctgattcccctgatggccgagggcaagatcctgccctat
ctggacgtgcccttccagcacgccagtccgcgcatcctcaagctgatgaagcgcccggcc
tccgccgagaaggtgctggacaggatccaagcctggcgccgcgcggtgccggacctgacc
attcgcagcaccttcatcaccggctttcccggcgagaccgaagctgaattcaacgagctg
ctggatttcctcgacgaggcccggatcgaccgcgtgggcgccttcgcctattcggcggtg
gagggcgcgacggccaacgaactgccgaacccggtgcccgaggcgttgcgcgaggagcgc
cggctgcgcctgatgcagcaccaggaggacatcagcacccagcgcctggagcgccgcatc
ggccagcgcatccgtgtcctggtggatgacatcgacgaggagggcgccatcgcccgctcc
gaaggcgacgccccggaaatcgacggcctggtgtacgtcaccgacggtcacgaactggaa
atcggcgagttcgccgaggtgacggtgcgggattgcgacgtgcacgacctctacgcgagc
atcgccacggaggaatga
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