Denitratisoma sp. DHT3: B9N43_04475
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Entry
B9N43_04475 CDS
T10559
Name
(GenBank) DNA polymerase III
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
deni Denitratisoma sp. DHT3
Pathway
deni03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B9N43_04475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deni03400
]
B9N43_04475
Enzymes [BR:
deni01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B9N43_04475
DNA repair and recombination proteins [BR:
deni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B9N43_04475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Uma2
Motif
Other DBs
NCBI-ProteinID:
QDX82839
UniProt:
A0A518UDV1
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All DBs
Position
complement(969654..970364)
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AA seq
236 aa
AA seq
DB search
MGLGPLWKLRRPAAGPEAAAASPEPAATPVVAQASAAPVEDSGTADRAGAIAAMDWPELE
ENIRACRACGLCRERKQAVPGVGDRRADWLFVGEGPGAEEDQRGEPFVGQAGKLLDAMLA
AIELKRGENVYIANTVKCRPPNNRTPEPEETAACWPFLERQIDLLRPRLIVALGRPAAQT
LLQTEVKIGAARGRLFAYRGTPVIVTYHPAYLLRNLTDKAKAWEDLLFARRTMADQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggggctgggaccgctatggaagctgcggcggccggcggccgggcctgaagccgccgcc
gcgtcgccggaaccggcggcgacgcccgtcgttgcgcaggcatccgccgctccggtggag
gactcgggaaccgccgatcgcgccggcgccatcgccgcgatggactggccggaactggag
gagaacatccgcgcctgccgcgcttgtggcctgtgccgggagcgcaagcaggcggtgccc
ggcgtcggcgaccgtcgggccgactggctcttcgtcggcgaggggccgggtgccgaggag
gatcagcgcggcgagcccttcgtcggccaggccggcaagctgctcgatgcgatgctcgcg
gccatcgagctgaagcggggcgagaacgtctatatcgccaataccgtgaagtgccggccg
cccaacaaccgcaccccggaaccagaggagacggccgcctgctggcctttcctggagcgg
cagatcgatctgctgcgacccaggctgatcgtcgccctggggcggccggcggcgcagacc
ctgctgcagaccgaggtgaagatcggcgccgcgcggggccggttgttcgcatatcggggt
acccccgtcatcgtcacttatcatcccgcctacctgttgcgcaatctgaccgacaaggcg
aaggcctgggaggacttgctgtttgcccgccgcaccatggcggaccagtga
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