Denitratisoma sp. DHT3: B9N43_04935
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Entry
B9N43_04935 CDS
T10559
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
deni Denitratisoma sp. DHT3
Pathway
deni03440
Homologous recombination
Brite
Enzymes [BR:
deni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B9N43_04935 (recC)
DNA repair and recombination proteins [BR:
deni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B9N43_04935 (recC)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDX80646
UniProt:
A0A518U7I4
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Position
complement(1088120..1091773)
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AA seq
1217 aa
AA seq
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MRGGREVPPPPILPLSGGGDCTGAPCPDVCPAVSAGDSAIIGLMFTLFHGNRQELLARLL
AERLKAAPAGLFEAEAVVVQSGPMARWLQLFLAEELGIAAQLRFPFPAGYLWELFAAVLD
DVPRSSPFAAGPLHWRLLRLLGQPREEALFAPLRHYLTAHGSQCSTSTHETRGRQEGPPP
PDLPLSGGGDRISSLRSDVCPAVSMGDFTLNRRDSLALRLGAVFEDYLAYRPDWLAAWSE
GRLLGLGPHEAWQAALWRELRAGIAGLPAAHPRDAFLAVLAREPRLAERLPRRIGLFGLG
NLPPPYFEVFRELGRYLDVSLYLLNPCRLHWGDVVARRVAARHAAQSIGSVGGFADPADA
GMADSLAVGNPLLGSLGTLSRQFFDMAAAGADAEIDVFVEPGREDLLARLQADLLDLVER
GGSTAAAPPVALAANDDGDTLQIHVCHGPMREVEVLHDRLLALFEADPGLRPGDVLVLTP
DIDAYAPLVEAVFAPVAGAALPAIPFTVADRPPAARAALPRAFAALLDLASGRLEAEEVL
AFLEQPPVARRLGFDSRRLERARDWVRAAAIRWGVDGAWRAAQGAAEGGMLPAREEHGWR
AGLERLLLGMAMPGEAESGLFLGRLPAAEIEGGAAGDLGRLIDFAESLFAAHAALNQARP
VAAWAEVLAGLLERLFDSGEDVADQRAAQALRAALQRVAADAAQAGCVDAVPLACLRQAL
EAAQAEAAPGWTFLGGGVTFAALRPYRAVPVRVLCLLGMNDGAFPRNPARPGFDLVARHP
RPGDRAPREEDRHAFLEALLSARDRLHISYVGRSSRDNSELPPSPLVSELLDVLARGYRR
ESAAGGAPDGHAVAASVIVEHPLQPFSRRYFDGSGPASYQADYAAASRAAAGRGGGGARQ
ARPFLAEPLPVVDDGANDDADKDALDLEALIRFLQNPARHLLRQRLGIHLEQSEGLIENA
EPFVLDPLARYGLDARIVEGRCAGESAETVMARAHARGELPHGAVGQAAFRRRWQALAPF
VESLARELAAESATEPAAAGIPSGEPARFEPVAIVLDLSLAGLRLGGQLSIPGPAGLLDW
RPGKTRAKDLLALWVRHLALNLAAPAGIRPVSRLLCLDASHRLGPVADAGACLTALLALW
RRGQRELLPFFPATALDCVRQKGGWRNTWDSDFAGARPEKDDPYFDLAFAGTDPLGEEFE
ALARQVFVPLLAALEEA
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggagggcgggaagtcccgccccctcccatcctccccctctccgggggcggcgat
tgcaccggcgcgccgtgtccggacgtttgccccgccgtttcagcgggcgattccgcgata
atcggcctcatgttcaccctgttccacggcaaccgccaggagctcctggcccggcttctg
gcggagcggctcaaggccgcgccggccggcttgttcgaagccgaggccgtggtggtgcag
agcgggccgatggcgcgttggctgcaactgttcctggccgaggaactgggcatcgccgcc
cagttgcgctttccctttcccgccggctacctgtgggaattgttcgccgccgtgctggac
gacgtgccgcgcagttcgccgttcgccgccggccccctgcattggcgcctgctgcgcctg
ctcggccagccgcgcgaggaggcgctgttcgcgccgctgcgccattacctaaccgctcat
ggaagccaatgctccacctcgacgcatgaaacacgcggaaggcaggaaggcccgccccct
cccgacctccccctctccgggggaggcgatcgcattagctcgctgcgctcggatgtttgt
cctgccgtttcaatgggcgatttcacgctgaatcggcgcgacagcctggcgctgcgcctg
ggcgcggtgttcgaggactacctggcctaccgtccggactggctcgccgcctggagcgag
ggccgcctgctcggcctggggccgcacgaagcctggcaggccgcgctgtggcgggagctg
cgggccggcatcgccggcctgccggcggcgcatccgcgcgacgcctttctcgccgtcctg
gcgcgggagccgcgtctcgccgagcgcctgccgcgccgcatcggcctgttcggcctgggc
aatctgccgccgccgtacttcgaggtcttccgcgaactcgggcgttacctggacgtgagc
ctgtatctgctcaacccctgccggctgcattggggcgacgtggtggcgcgccgcgtcgcg
gcgcgccatgcggcccaatccatcggctccgtcggtggtttcgccgatcccgccgatgcg
gggatggcggattcgctggccgtcggcaatccgctgctcggttccctgggcaccctctcg
cggcagttcttcgacatggccgccgccggggccgacgccgagatcgacgtcttcgtcgag
cctgggcgggaggacctgctggcgcggctccaggccgacctgctggacctggtggaacgg
ggcgggagcaccgccgcggcgccgcccgtggcgctggcggcgaacgacgatggcgatacg
ctgcaaatccatgtctgccacggcccgatgcgggaagtggaagtgctgcacgaccggctg
ctggcgctgttcgaggccgatcccggcttgcgtcccggcgacgtgctggtgctcacgccg
gacatcgacgcctatgcgccgctggtggaggcggtgttcgccccggtcgcgggcgcggcg
ctgcccgccattcccttcaccgtcgccgaccggccgccggccgcgcgggccgctttgccg
cgggcgttcgccgccttgctcgatctggcgtccggccgcctggaggccgaggaggtgctg
gccttcctggaacagccgccggtggcccggcgcctcggcttcgactcgcggcgcctggag
cgggcgcgcgactgggtgcgggccgccgcgatccgctggggcgtggatggcgcctggcgc
gcggcccagggggcggccgagggcggcatgctgccggcgcgcgaggagcatggctggcgg
gccggactggagcgcctgctgctcggcatggcgatgccgggggaggcggagtccgggctg
tttctcggccgcctgccggcggcggagatcgagggcggcgcggcgggcgacctgggccgt
ctgatcgatttcgccgaaagcctgttcgcggcccacgcggcgctgaaccaggcgcgtccc
gtggcggcctgggccgaagtgctcgcggggctgctggaacgcctgttcgacagcggcgag
gacgtcgccgaccagcgcgccgcccaggccctgcgcgccgcgttgcagcgggtggcggcc
gacgcggcccaggccggctgcgtcgacgccgtgccgctggcctgcctgcgccaggccctg
gaggccgcccaggccgaggcggcgcccggctggaccttcctcggcggcggcgtcaccttc
gccgccctgcgtccctatcgcgccgtgccggtgcgggtgctgtgcctgctgggcatgaac
gacggcgcctttccgcgcaatccggcgcggcccggcttcgacctcgtcgcccgccatccg
cggcccggcgaccgcgcgccgcgcgaggaggaccgccacgccttcctcgaagcgctgctc
tcggcccgcgaccggctccacatcagctacgtcggccgcagcagccgcgacaacagcgaa
ctgccgccctcgccgctggtcagcgaactgctcgacgtgctggcgcgcggctaccgccgc
gagtccgccgctggcggcgctccggacggccatgccgtcgcggcgtccgtcatcgtggag
caccccttgcagcccttcagccggcgctacttcgacggcagcggcccggccagctatcag
gccgactatgccgccgccagccgcgccgcggccgggcggggcggcgggggcgcccggcag
gcgcggcccttcctggccgagccgctgccggtcgtggatgacggcgcgaatgatgacgcg
gataaggatgcgctcgacctggaggcgctgatccgcttcctgcaaaacccggcccgccat
ctgctgcgccagcgcctgggcatccatctggaacagagcgaagggctgatcgagaacgcg
gaacccttcgtgctcgaccctctggcccgctacggcctcgatgcccgcatcgtcgagggc
cgctgcgccggcgagtccgcggaaaccgtgatggcccgggcgcatgcgcggggcgaactg
ccgcacggcgccgtcggccaggccgcgttccgccgccgctggcaggcgctggcgccgttc
gtcgaaagcctggcccgggaactggccgcagaatcggccacagagccggccgccgccggc
atcccctccggcgagccggcccggttcgaaccggtcgcgattgtcctcgacctgtccctg
gccggactgcgcctgggcggacaactgtccattccggggccggccggcctgctcgactgg
cggcccggcaagacgcgggccaaggacctgctggccctctgggtgcgccacctggcgctg
aacctggcggcgcccgccggcatccgcccggtcagccggctgctgtgcctcgacgccagc
catcggctggggccggtggccgacgccggcgcctgcctgacggcattgctggccctgtgg
cggcgcggccagcgtgaactgctgcccttcttcccggccacggcgctcgactgcgtccga
cagaagggcggctggcgtaatacctgggacagcgatttcgccggcgcccggcccgagaag
gacgacccctatttcgacctcgccttcgccggcaccgacccgctgggcgaggaattcgag
gcgctggcgcggcaggtgttcgtccccttgctcgccgccttggaggaggcgtaa
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