Denitratisoma sp. DHT3: B9N43_05670
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Entry
B9N43_05670 CDS
T10559
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
deni Denitratisoma sp. DHT3
Pathway
deni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9N43_05670 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deni03019
]
B9N43_05670 (pnp)
03016 Transfer RNA biogenesis [BR:
deni03016
]
B9N43_05670 (pnp)
Enzymes [BR:
deni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B9N43_05670 (pnp)
Messenger RNA biogenesis [BR:
deni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B9N43_05670 (pnp)
Transfer RNA biogenesis [BR:
deni03016
]
Prokaryotic type
tRNA degradation factors
B9N43_05670 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_RRP5
DUF5813
Motif
Other DBs
NCBI-ProteinID:
QDX80774
UniProt:
A0A518U7Y2
LinkDB
All DBs
Position
complement(1250534..1252645)
Genome browser
AA seq
703 aa
AA seq
DB search
MLTAIKKSFNYGAHTVTLETGEIARQAGGAVMVNMDDTVVLASVVGATKAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPDGFYNEVQVVCTVMSC
NPEIDPDIPAMIGASAALAISGIPFNGPIGGARVGYIDGQYVLCPTKSQLANTQLDLVVA
GTAAAVLMVESEAKQLSEDVMLGAVVFGHEQMQVAINAINELVEQAGKPEWDWQAPAKDE
ALITRIDELAEADMREAYRITSKQARTQKTREIASKVTEALCVEGGPDANTVGNLLFELE
ARIVRSQILNGEPRIDGRDTRTVRPIAIRSGVLPRTHGSSLFTRGETQALVVATLGTGRD
EQIIDALQGEYRERFMLHYNMPPYATGECGRVGSPKRREIGHGRLAKRALVAVLPSAEEF
AYSMRVVSEITESNGSSSMASVCGGSLALMDAGVPLKAHVAGIAMGLIKEGNRFAVLTDI
LGDEDHLGDMDFKVAGTDNGITALQMDIKIQGITKEIMQVALAQAKDARLHILTQMQQSM
SGAREDVSAYAPRMITMKINPEKIRDVIGKGGATIRGLTEETGCVIDIQDDGSVTISSVN
ADAAQVAKKRIEDITAEVEVGKVYEGTVLRLLDFGAIVQVLPGKDGLLHISQIANERVNA
VADYLKEGQVVKVKVIETDDKGRVRLSMKAVAAEGAPAPEAAQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgctgactgcgatcaagaagagtttcaattacggtgcccataccgtcaccctggagacg
ggcgagatcgcccgccaggccggcggcgcggtgatggtgaatatggacgacacggtcgtg
ctggcctccgtggtgggcgccaccaaggccaagccgggccaggatttttttcccctgacc
gtcgattacgtcgagaagacctacgcggccggcaagatccccggcggcttcttcaagcgt
gaaggccggccttccgagaaggagaccctgacctcccgcctgatcgaccgcccgatccgc
cccctgttcccggacggcttctacaacgaagtgcaggtggtttgtaccgtgatgtcctgc
aatcccgagattgacccggatattcccgcgatgatcggcgcttccgccgccctggccatt
tcgggcatcccgttcaacggcccgatcggtggcgcccgcgtcggctacatcgacggccag
tacgtgctgtgcccgaccaagagccagctggccaacacgcaactcgacctggtcgtggcc
ggtactgccgctgccgtgttgatggtggagtccgaggccaagcagctttccgaagacgtg
atgctgggcgccgtggtcttcggccacgagcagatgcaggtcgccatcaatgccatcaac
gaactggtggaacaggctggcaaacccgaatgggactggcaggcgccggccaaggacgag
gccctgatcacccgcatcgacgagctggctgaagccgatatgcgcgaggcgtatcgcatc
accagcaagcaggcccgcacccagaaaacccgggagatcgcttccaaggtgaccgaggcg
ctgtgcgtggaaggcggccccgacgccaacaccgttggcaatctgctgttcgaactggaa
gcccgcatcgtccgcagccagatcctcaacggcgagccgcgcatcgatggtcgcgatacc
cgtaccgtgcgtcccattgccatccgctccggtgtgctgccccgtacccatggttcctcc
ctgttcacccgcggcgagacccaggccctggtggtcgccaccctgggcaccgggcgcgat
gagcagatcatcgatgctttgcagggtgagtaccgcgagcgcttcatgctccactacaac
atgccgccctatgccaccggcgaatgcggccgcgtcggctcccccaagcgtcgcgagatc
ggtcacggccgcctggccaagcgcgccctcgtcgccgtgctgcccagcgcggaggagttc
gcctactccatgcgcgtcgtttcggagatcaccgaatccaacggttcctcctccatggcc
tccgtctgcggcggctccctggccctgatggacgccggcgtgcccttgaaggcccatgtg
gccggcatcgccatgggcctgatcaaggaaggcaaccgcttcgcggtgctgaccgacatc
ctgggcgacgaggaccacctgggcgacatggacttcaaggtggccggcaccgacaacggc
atcaccgccttgcagatggacatcaagatccagggcatcaccaaggagatcatgcaggtg
gccctggcccaggccaaggacgcccgtctgcatatcctgacccagatgcagcagtccatg
tccggcgcccgcgaggatgtctccgcctacgcaccccgcatgatcacgatgaagatcaac
cccgaaaagatccgcgacgtgatcggcaagggcggcgccaccatccgcggcttgaccgag
gaaaccggttgcgtgatcgacatccaggacgacggcagcgtcaccatctcctcggtcaat
gcggacgcggcccaggtggccaagaagcgcatcgaggacatcaccgccgaggtcgaagtg
ggcaaggtgtatgaaggcacggtgctgcgtctgctggacttcggcgccatcgtccaggtg
ctgcccggcaaggacggcctgctgcacatctcccagatcgccaacgagcgggtcaacgcc
gtggccgactatctcaaggaaggccaggtggtgaaggtcaaggtcatcgagaccgacgac
aagggccgcgtgcgcctgtcgatgaaggcggtggccgccgaaggagcgcccgctcccgaa
gctgcccagtaa
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