KEGG   Denitratisoma sp. DHT3: B9N43_07930
Entry
B9N43_07930       CDS       T10559                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
deni  Denitratisoma sp. DHT3
Pathway
deni02024  Quorum sensing
deni03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:deni00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B9N43_07930
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    B9N43_07930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:deni03019]
    B9N43_07930
   03036 Chromosome and associated proteins [BR:deni03036]
    B9N43_07930
Messenger RNA biogenesis [BR:deni03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     B9N43_07930
Chromosome and associated proteins [BR:deni03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    B9N43_07930
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QDX81174
LinkDB
Position
complement(1722654..1722887)
AA seq 77 aa
MSNKGQMLQDPFLNTLRREHIPVSIYLVNGIKLQGQVESFDQYVVLLKNTVTQMVYKHAI
STVVPARPVNFSQDAGD
NT seq 234 nt   +upstreamnt  +downstreamnt
atgagcaataaagggcaaatgttacaagacccgttcctgaatacgctgcgtcgcgagcat
attccggtgtccatctaccttgtcaatggcatcaagctgcagggtcaggtcgagtccttc
gaccagtacgtggtgctgctcaaaaacaccgtgacccagatggtgtacaagcacgccatt
tccaccgtggtgccggcgcgccccgtcaatttcagccaagacgccggcgattga

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