Denitratisoma sp. DHT3: B9N43_09035
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Entry
B9N43_09035 CDS
T10559
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
deni Denitratisoma sp. DHT3
Pathway
deni02020
Two-component system
deni02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B9N43_09035
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B9N43_09035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deni03021
]
B9N43_09035
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
deni02035
]
B9N43_09035
Transcription machinery [BR:
deni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B9N43_09035
Bacterial motility proteins [BR:
deni02035
]
Flagellar system
Flagellar assembly proteins
Stator
B9N43_09035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
DUF134
Motif
Other DBs
NCBI-ProteinID:
QDX81374
LinkDB
All DBs
Position
complement(1955927..1956694)
Genome browser
AA seq
255 aa
AA seq
DB search
MYTAQGALEREQLVRQYAPLVKRLAYHLMAKLPASVQVEDLVQNGMLGLLDALSRFEDGQ
GAQFETYAVQRIRGAMLDGLRENDWLPRGVRREMRRVEAMIHQLEHQYGRQPLEGELAGA
LGLSLEDYQTLLLEARGHQLLYLEDMNGDSGEGYLERNAIGDGGDPLQMLEDADMRSALV
RAIGALPEREQLMMALYYEQDLNLREIGEVMGVSESRVCQIHTQAVARLRAAVVGGERTP
VTKAKRGRRPKGVTA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgcccaaggtgccctcgaacgagaacagctcgttcgccaatatgctccattg
gtaaagcgcctcgcctatcacctgatggcgaagctgccggccagtgtccaggttgaggac
ctggtccagaacggaatgctggggctgctggacgcgctttcccgcttcgaggatggccag
ggcgcccagttcgaaacctacgccgtccagcggatacgcggtgcgatgctcgacggcctg
cgcgaaaacgactggctgcccaggggcgtccggcgcgagatgcgccgggtggaggcgatg
atccatcaacttgaacaccaatatgggcgccagcccttggagggggaactggccggcgcc
ctcggcctgtccctggaggattaccaaacgctcctgttggaagcgcgcggccaccagctg
ctctatctggaggacatgaacggcgattccggagagggctatctggaacgcaatgccatc
ggcgacggcggcgaccccttgcagatgctcgaggacgccgacatgcggtccgctctggtc
cgtgcgattggcgccttgccggagcgggaacaactgatgatggccctgtattacgaacag
gatctcaatctgcgggagatcggcgaggtgatgggcgtttcagaatcccgtgtctgccag
atacacactcaggccgtggctcgactgcgggccgccgtagtggggggcgaacgcacgccg
gtgaccaaggcaaagcgcgggcgcaggcccaaaggcgtgactgcctga
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