Denitratisoma sp. DHT3: B9N43_09305
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Entry
B9N43_09305 CDS
T10559
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
deni Denitratisoma sp. DHT3
Pathway
deni00470
D-Amino acid metabolism
deni00550
Peptidoglycan biosynthesis
deni01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B9N43_09305 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B9N43_09305 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
deni01011
]
B9N43_09305 (murD)
Enzymes [BR:
deni01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
B9N43_09305 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
deni01011
]
Precursor biosynthesis
Amino acid ligase
B9N43_09305 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
AlaDh_PNT_C
2-Hacid_dh_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QDX81423
LinkDB
All DBs
Position
2017284..2018789
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AA seq
501 aa
AA seq
DB search
MNLGGRHVLVLGLGESGLAMAQWCARQGARVRVVDSRAAPPFLDELRRSAPEAEFRCAAL
DERFDKSLLNGIELLALSPGLSGGLMAVIHARAQGIAVVGEIELFAWALRALGVRGNHGP
YSRVIAITGTNGKTTTTALAGHLCRGTGKATGVAGNISPAALHALMAALDQGTLPDIWVL
ELSSFQLETLNSLDADAATVLNVSDDHLDRYIDLDEYASAKARIFAGRGAQVLNRDDPRV
KRMALAGRPLISFGLDAPGNEQDFGLRRNRGEPWIVQGDRFLLPVSELPIAGLHNAANAM
AALALCAGIGLDAGRLLPALRDFRGLPHRVERVAEIDGVGYYDDSKGTNVGATVAALTGL
GGQLAAQTSHLPSSGREAGRNGSSTPAQPGNQHDPRIVLIAGGDGKGQDFRPLSPAVARH
CRAVLLIGRDGPKIGAALAGGGVPVRQAADMDEAVRLAATAARPGDVVLLSPACASFDMF
HNYEHRAQVFIAAVRTLAGAT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcggcggcaggcacgtcctcgttctcggcctcggcgaatcgggactggcgatg
gcgcagtggtgcgcccgtcagggcgcccgcgtgcgggtggtggacagccgcgccgcgccg
ccctttctcgacgaactgcgacgcagcgcgccggaggccgagttccgctgtgccgccctc
gacgagcgcttcgacaagtcgctgctgaacgggatcgagctgctggcgctgtcgcccgga
ctttccggcggcctgatggcggtgatccatgcccgcgcccagggcatcgcggtagtgggc
gagatcgaattgttcgcctgggcgctgcgcgcgctgggcgtgcgcggcaaccacggcccc
tacagccgggtgatcgcgatcaccggcaccaacggcaagaccaccaccaccgcgctggcc
ggccatctgtgccgcggcacgggcaaggcgacgggcgtggccggcaacatttccccggcc
gcgctgcacgcgctgatggcggccctggatcagggcacgctgccggatatctgggtgctg
gaactgtccagcttccaactggagaccctgaacagtctggacgccgacgcggcgacggtg
ctgaacgtcagcgacgaccatctggaccgctacatcgacctggacgagtacgccagcgcc
aaggcgcggattttcgccggacgcggcgcgcaggtgctgaaccgcgacgacccgcgggtg
aagcgcatggcgctggcgggccgccccttgatcagtttcggcctcgatgcgccgggcaac
gaacaggatttcggcctgcgccggaaccggggcgaaccctggatcgtccagggcgaccgc
ttcctgctgccggtttccgagctgccgatcgccgggctgcacaacgccgccaacgcgatg
gcggcgctggcgctgtgcgccggcatcggccttgatgcgggaagactgctgcccgcgctg
cgcgacttccgcggcctgccccatcgcgtcgaacgggtggccgagatcgacggcgtcggt
tactacgacgactccaagggcaccaacgtcggcgccaccgtcgccgcactcacgggcctt
ggcggccagttggccgcccaaaccagtcacctcccttcctcgggaagggaggccgggagg
aatggctcctccacgccggcgcagcccggcaatcaacacgatccaaggatcgtgttgatt
gccgggggcgatggcaagggacaggacttccgtccgctgagcccggcggtcgcgcgtcat
tgccgggcggtgctgttgatcggccgcgacgggccgaagatcggcgcggcgctggccggc
ggcggcgtgcccgtccgtcaggcggcggacatggatgaagccgtgcgcctggccgccacg
gccgcgcgtcccggcgatgtcgtgctgctctctcccgcctgcgccagcttcgacatgttc
cacaactacgagcaccgcgcccaggtcttcatcgccgcggtgcgcaccctggcgggcgcg
acatga
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