Denitratisoma sp. DHT3: B9N43_12670
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Entry
B9N43_12670 CDS
T10559
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
deni Denitratisoma sp. DHT3
Pathway
deni03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B9N43_12670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deni03400
]
B9N43_12670
Enzymes [BR:
deni01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B9N43_12670
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B9N43_12670
DNA repair and recombination proteins [BR:
deni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B9N43_12670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-C2HC_3
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QDX82026
UniProt:
A0A518UBG7
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All DBs
Position
2758703..2759527
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AA seq
274 aa
AA seq
DB search
MPELPEVEVTRRGLAPALLGRSASGAVARVPALRYPLPADLERRLAGQVLQSIRRRGKYL
LLEFGSGCLLIHLGMSGSLRLVPAHQAPGKHDHLDLRFGHGEDVRTVRLRDPRRFGAVLW
LERHAQTHPLLAVLGIEPLTEEFTPRWLFDASRGLKAPIKNVLMDSHRIVGVGNIYASES
LFRAGIDPRTPAGRISLARCRRLVPAIKDTLNEAIAAGGSSLRDFIHSDGGSGYFQLQTF
VYDREGQPCRRCGGLIRQIRQGQRATYYCPRCQR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgaagtcgaggtgacccgccgcggcctggcgccggccttgctggga
cggtccgccagcggcgccgtggcgcgggtgccggcgctgcgctatccgctgcccgccgat
ctggaacggcgcctggcggggcaggtgctgcaatcgatccggcgccgcggcaaatacctg
ttgctggagttcggcagcggctgcctgctgatccacctgggcatgtccggcagcctgcgc
ctggtgccggcccatcaggcgccggggaagcacgaccacctggatctgcgcttcggccac
ggagaggatgtccgcaccgtgcgcctgcgcgacccgcgccgtttcggcgccgtgctctgg
ctggagcggcacgcgcaaacccatccgctgctggcggtgctgggcatcgagccgctgacc
gaggaattcacgccgcgctggctgttcgatgccagccgcgggctcaaggcgccgatcaag
aacgtgctgatggacagccaccgcatcgtcggcgtgggcaacatctacgcgtcggaaagc
ctgttccgcgccggcatcgatccgcgcaccccggccggcagaatctccctggcccgctgt
cggcggctggtgccggcgatcaaggacaccttgaacgaggcgatcgccgccggcggcagc
agcctcagggacttcatccattccgacggaggttcgggctatttccagctccagaccttc
gtctacgaccgggaaggccagccctgccggcgttgcggcggcctcatccgccagatccgg
cagggacagcgggcgacctactactgcccccgctgtcagcgttga
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