Denitratisoma sp. DHT3: B9N43_15700
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Entry
B9N43_15700 CDS
T10559
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
deni Denitratisoma sp. DHT3
Pathway
deni02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B9N43_15700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
deni02022
]
B9N43_15700
02035 Bacterial motility proteins [BR:
deni02035
]
B9N43_15700
Two-component system [BR:
deni02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
B9N43_15700
Bacterial motility proteins [BR:
deni02035
]
Pilus system
Twitching motility proteins
B9N43_15700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
AAA_5
VpsR
HTH_50
FleQ
HTH_30
HTH_28
DUF7231
Motif
Other DBs
NCBI-ProteinID:
QDX82550
LinkDB
All DBs
Position
3407905..3409266
Genome browser
AA seq
453 aa
AA seq
DB search
MAAGAERRKQDGRRVLIVDDEADIRELLDLTMARMGLDAHCVGTLAEARRFLDKERYQLC
LTDMRLPDGEGLELVRHIGEQAPELPVAVITAHGSAENAVSALKAGAFDYLTKPVSLDQL
RALVKSALELPASPDQRAQAVPVGLIGQSPAMREVRDLIERVARSQAPVHITGESGSGKE
LAARLIHRRGARQHGPFVPVNCGAIPENLMESEFFGYRKGAFTGAEADRDGFFHVADGGT
LFLDEVADLPLPMQVKLLRAIQEKKVRKVGSTAEEAVDVRIISATHQNLRHLVEQGKFRQ
DLLFRLNVLELRMPALRECREDIPLLAEQVLDRLARQNPGKPPCLTAGALRALTDYPFPG
NVRELENVLERALALRQGDSIDVSDLNLVPVSESQQVPPLGQLPLQDHLDRVERQVILDA
LQKTRFNRTAAARLLGVTFRSLRYRMERLGLND
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgggtgctgagcgcaggaaacaggacggtcggcgcgtcctgatcgtggacgac
gaggcggatatccgggagttgctggatctcacgatggcccgtatgggtctggatgcgcat
tgcgtgggcacgctggccgaggcccgccgcttcctggacaaggagcgctaccagctgtgc
ttgaccgacatgcgcttgcccgacggggaaggccttgaactggtgcgccatatcggcgag
caggcccctgagcttcccgtggcggtgattaccgcccacggcagcgcggagaatgccgtt
tccgcgctcaaggcgggcgccttcgattatttgaccaagccggtctccctcgatcagttg
cgcgccctggtgaagagcgcactggagctgcccgcatccccggaccagcgtgctcaggcg
gttcctgtgggattgatcggacaatcgccggccatgcgggaagtccgcgatctgatcgag
cgcgtcgcgcgcagccaggcgccggtgcatatcaccggcgagtccggcagcggcaaggaa
ttggcggcgcggctgatccatcggcgcggcgcccgtcagcacggccctttcgtgccggtg
aattgcggcgccattccggaaaacctgatggagagcgagttcttcggctatcgcaagggt
gctttcaccggcgcggaggccgaccgggacggatttttccatgtcgccgacggtgggacc
ctgtttctcgacgaggtggccgaccttcccttgcccatgcaggtgaagctgctgcgggcg
attcaggaaaagaaggtgcgcaaggtcggcagcacggccgaggaagcggttgacgtgcgc
atcatcagcgccacgcatcagaatctgcggcacctggtggaacagggcaagttccgccag
gatctgctgtttcgcctgaatgtcctcgaattgcggatgccggccttgcgggagtgccgt
gaggatattcccctgctggcggagcaggtgctcgaccggctggcgcggcagaatccggga
aagccgccatgtctcacggctggcgcgctgcgggcgctgaccgactatccatttccgggc
aacgtgcgcgaactcgaaaatgtactggaacgggcgttggcgctgcggcagggggacagt
atcgatgtgtccgatctcaatctggttccggtttcggaatcgcagcaagtcccgccgctg
ggacaactgccgttgcaggaccacctcgatcgagtggaacggcaggtcatcctcgatgca
ttgcagaagacccgtttcaaccgcaccgcggcggcccggctgctcggcgtgacttttcgc
tctctgcgctatcgcatggaacgcctgggattgaatgactga
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