Denitratisoma sp. DHT3: B9N43_15975
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Entry
B9N43_15975 CDS
T10559
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
deni Denitratisoma sp. DHT3
Pathway
deni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
deni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B9N43_15975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deni03021
]
B9N43_15975
03400 DNA repair and recombination proteins [BR:
deni03400
]
B9N43_15975
Enzymes [BR:
deni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B9N43_15975
Transcription machinery [BR:
deni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B9N43_15975
DNA repair and recombination proteins [BR:
deni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B9N43_15975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
SLT
Motif
Other DBs
NCBI-ProteinID:
QDX82601
UniProt:
A0A518UD52
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All DBs
Position
3450942..3451925
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AA seq
327 aa
AA seq
DB search
MQSNALLKPRIIDVQTLSPVHARVVMEPFERGYGHTLGNALRRILLSSMPGAAATEVSID
GVLHEYSTLEGVREDVVDILLNVKGVVLKLHNRAEATLTLSKNGEGVVTAADIETGHDVE
IINPDHVLAHVAPGGRLAMQIKIETGRGYVPANVRPAAKEEGKAIGRILLDSSFSPVRRV
SYQVESARVEQRTDLDKLIIDLETNGAVDPEESIRYAARILMDQLSVFADLENTAVAAIE
QKQIPVAPELLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEKLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaacgctcttcttaagcctcgcatcattgatgtccagactctgtccccggtc
catgcccgtgtcgtgatggagccgtttgagcgcgggtatggtcacactctggggaatgct
ctgcgccgtattttgttgtcttcgatgccaggtgcagctgcaacagaggtttccattgat
ggggtattgcatgagtactctaccttggagggcgtgcgggaagacgtggtcgatattctg
ctcaatgtcaaaggtgtggttctcaagctgcataatagggctgaggctacactcactctt
tccaagaatggtgagggtgttgttaccgccgctgatattgaaaccggtcacgacgtcgag
atcattaatcccgatcatgtgctcgcccatgtggctcccggtgggcggctagcgatgcaa
attaagattgagaccgggcgcggttatgtgcctgcgaatgttcggcccgccgctaaggaa
gagggcaaggcgattgggcgtattttgctggattcttccttcagtccggttcgtcgtgtc
agttatcaagtggagtctgctcgcgtcgaacagcgtacagatttggacaagctgattatc
gaccttgagaccaatggcgcagtggacccggaagagtctattcgctatgcagctcgtatt
ctgatggatcagctatcggtatttgccgatttggaaaatactgctgtggcggcgatcgaa
caaaagcagattccggtggcacccgagttgttgcgcccggtggatgatcttgagctcact
gttcgctctgcaaactgcctgaaggcggaaaatatctattacattggggatctgattcag
cgcactgaaacagaactcctcaaaactcccaatcttggccgtaagtctctgaatgagatc
aaagaggtgctcgcttcacgtggacttacccttggtatgaagctggaaaactggcctccc
gcaggcttggaaaaacttggttga
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