Desulfobulbus oralis: CAY53_00850
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Entry
CAY53_00850 CDS
T05339
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
deo
Desulfobulbus oralis
Pathway
deo03420
Nucleotide excision repair
deo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAY53_00850
03430 Mismatch repair
CAY53_00850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_00850
Enzymes [BR:
deo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAY53_00850
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAY53_00850
MMR (mismatch excision repair)
Other MMR factors
CAY53_00850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AVD70206
UniProt:
A0A2L1GKP1
LinkDB
All DBs
Position
complement(204511..206706)
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AA seq
731 aa
AA seq
DB search
MQNDTLFPAGEAILEGLNPAQRAAVLHGSGPLLVIAGAGSGKTRMLVHRMAYLVAGGAAP
ESILLLTFTRKAAQNMLWRAAQLTGANCRQVMGGTFHATANLLLRQYGRYLDIEPNFSII
DRADAEGIINLIKSSLGQSGADKRFPSKRVILNLISGAVNKNASLEELVMTGAMHLVEFL
DDFQEIAGHYAAFKRDHGLMDYDDLLVNWHRLLAECEAARAALSARFQHVLVDEYQDTNH
LQAEIVRLLAGHGNVMVVGDDAQSIYSFRGADFANIMRFEKQFPGVRRVLLEQNYRSTRP
ILELSNDIIAHAEEHFDKALFTESEGGVLPELAVCANEAAEARFVADRVEQLVAGGLPAS
EIAVLFRSAFHSFKLEIELAGRSLTFEKRGGLKLTESAHTKDVLAFFRVTVNPRDELSWS
RLLLQLDRVGPRTAQKIVRAITAEADPVAALGRYPGRGSWQAQLRQLVACLTSLQGEGQT
PAALFDAVMGYYQPVFEKLYFDDYPKRSRDLDQLKALAAGYGDLRAFVDDTALDPPESEA
AGESGHRLVLSTIHSAKGLEWTVVFVIGLAVGRFPGQYVLPPGEQWEEERRLFYVAATRA
KKRLFLSFPREMFNSGQRVYAGMSSFVAELKPVLYQTVTVEQQGPARAGAGAPRTDAVPE
PGPASAASSRLGPSLAPGELLPGMRVGHAFFGPGTISRLPAPGRVEVLFDRHGSKILHLD
YARLSKLVDSG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgacacccttttccctgcaggcgaggccattctcgaaggtttgaatccagca
cagcgggcggcggtgctgcacggcagcgggcccctgctcgtgatcgcgggcgcgggcagc
ggcaagacccgcatgctggtgcatcgcatggcctatctggtggccggcggcgcagctccg
gaatccatcctgctcctgacctttacccgtaaggccgcgcagaacatgctctggcgggcg
gcgcagttgacgggcgcgaactgccgtcaggtcatgggcggcaccttccacgccaccgca
aacctgcttttgcgccaatatggccgctatctggacatagaaccgaacttttccatcata
gaccgggcggatgccgagggcatcatcaacctcatcaagtcttctcttggccaatcgggc
gcggacaagcgctttccatcaaagcgcgtgatcctgaatctgatttcaggcgcggtgaac
aagaacgccagcctggaagagctggtcatgacaggcgccatgcacctggttgaatttctg
gacgattttcaggagattgccggtcattatgcggcattcaaacgcgaccacggcctcatg
gactatgatgacctcctggtcaactggcaccgcctgctggccgagtgcgaagcggccagg
gcagcgctctccgcccgctttcagcatgtcctggtggacgaataccaggacaccaaccac
ctgcaggcggaaatcgtgcggctcctggccgggcacggcaacgtgatggtggttggcgac
gacgcccagtccatatacagcttccgcggcgcggattttgccaatatcatgcgctttgaa
aagcagttccccggtgtgcggcgggtgctgctggaacagaattaccgctccacccggccc
attctggagctgagcaacgatatcatcgcccacgccgaggaacacttcgacaaggcgctt
ttcaccgaaagcgagggcggggtgctgccggaactggctgtctgtgcgaacgaggccgcc
gaggcccgtttcgtggccgatcgggtggaacaactcgtggcaggggggctgccggccagc
gagatcgcggtgcttttccgctcggccttccactccttcaagctggagatcgagttggcg
ggccggagtctgacctttgaaaagcgtggcggcctgaagctcaccgaatccgcgcacacc
aaagacgtgctcgcctttttccgggtcacggtcaaccccagagacgagctttcctggagc
cgccttttgctgcaactggacagggtcggtcccagaacagcccagaagatcgtgcgggcc
atcacagcggaagccgacccggtggcagcgctgggccgctatccgggacgcggttcctgg
caggcgcagttgcggcagctcgtggcctgtctgaccagcctgcagggcgagggccagacg
ccggccgcactttttgatgcggttatgggctattatcagccggttttcgagaaactctac
tttgacgactaccccaagcgcagccgcgatttggaccagctcaaggcgctggcagcgggc
tacggcgacctgcgcgcctttgtggacgacaccgcgctcgacccgccggagagcgaggcg
gcgggcgagagcgggcacaggctggtgctttccaccattcactcggccaagggcctggag
tggacggtggtttttgtgatcggtctggctgtggggcgcttccccggccagtacgtgctg
ccgccgggcgagcagtgggaagaggaacgccggctcttttacgtggccgcgacccgggcc
aaaaagcggctctttttaagtttccccagggaaatgttcaactccggtcagcgggtctat
gccggcatgtcgtcctttgtggccgaactgaagccggtgctgtatcagaccgtcaccgtg
gagcaacagggccctgcccgtgccggagcgggcgctcccaggaccgatgccgttccggaa
cccgggccggcttcggccgcttcaagccgcctggggccgtctctggcgcccggtgaactc
ctgcccggaatgcgagtgggccacgctttcttcgggccgggcaccatcagccgcctgccc
gctccgggtcgggttgaggtgctctttgaccgccatggcagcaaaatattgcatttggat
tatgccaggctgagcaaactcgtggactctggctag
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