Desulfobulbus oralis: CAY53_01940
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Entry
CAY53_01940 CDS
T05339
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
deo
Desulfobulbus oralis
Pathway
deo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAY53_01940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_01940
Enzymes [BR:
deo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CAY53_01940
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAY53_01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AVD70395
UniProt:
A0A2L1GL46
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All DBs
Position
473738..476983
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AA seq
1081 aa
AA seq
DB search
MHLYQSNRLEYLLALLVEICTAQPLADPLATEIIVVQHPGMGRWLAREWALKTGIAGLLS
FPLPARALGDLYRLLRPEAAPEAVWQRSVLRWRILALLPAYAAEAGSAGVFAPLAPYLGA
ASDGTALFQLAGRIAEVFDRYQVYRPELLLRWEAGEDADKWQARLWRRLCAGQTPHRAWL
YADCRRRLMAPPPILPERLHLFGMSSLAPVYWQLFQQLGRHMAVHCFQLSPCRGFWHDLK
PKWRQAREQEADALLAMKALPKEPNALLVQFGQAGREFACQILEGGPDNPVELYGEPEGD
TLLARVQSHLLNMQAMPQRPEEREFMDENDLSLQFHDCSSELREVQVLHDYLLDCCQRDP
ELTPGDILVAAPDIGRYAAAVQAVFGEAPPERFMPFALADQPLAAAIRLPRVFLELIACL
QSRCTSTELLALLEEPALHRRFGLEAGHLPTACKLLRQAGICWGLDAEHRLDLDCGPASG
EAHSFRHGLDRLLLGFAMGEADALHAGLYPSVPAGDEAMVVLQALLALHDRLAAWRKIWQ
RQRPAAEWPPLLLRMQEDFFAPAGGAEGVQRLREAIHELSEELALSGYSAPLAPKSLTLR
LEESLNAMDNGQAFLSGRVTFCNMVPMRSLPFQIICLLGMNDGMFPRQQRPVGFDEMAKH
PRLGDRKRREDDLYLFLEAMLSARKALYLSWLGHSQQDGTERPPSLALSALADYLDAAFQ
IKGQPEKRPSQAQSVQHPFQPFSPKNYGRALEGCGLAWPASFDPAWLPATGPGAAPAFLD
GPLPLEAPVGAIELSALLRFWRHPAAYFLQYRLGMALHREEDMPAEAEPFTLDGLDNYLL
REAVVERLLAGQDEAHIGAVLRAQGCLPEGQFAALALRGPAEEGASLAKALLPLLAEPAE
PQELQLTVEGYQVSGRVDRLYRAGRVLWTAGQATSGRLTDVWLCHLALAASGRPCSSTLV
FRNKDTAVQIWTWPELAQDEAAALLAPWLRGYAEGQETALPFFPKSSLAWAESMQKTDDE
GIALSRAGQRWQGSHTGAERDEAVFALLFSGKNPFDDTFIRLAGLLQSLLARKAEAANAG
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcatctctaccaatccaaccgcctggaatacctgcttgccctgctggtcgagatctgc
accgcccagccgctcgccgatcccctggccacggaaatcatcgtggtgcagcacccgggc
atgggccgctggctggcccgcgaatgggcgctgaaaaccggcattgccgggctcctgtcc
tttcccctgcccgcaagggccctgggtgatctctaccggctcctgcggccggaagccgcc
cctgaggcggtgtggcaacgttcggtgctgcgctggcgcatcctggccctgctgccggca
tatgccgcagaggctggaagcgctggagtcttcgccccgctcgccccatatctcggggca
gcaagcgatggcacggccctgttccaactggccggtcgcatcgcagaggtctttgaccgg
tatcaggtgtaccggccggagctgctcctgcgctgggaagcaggcgaggatgcggacaag
tggcaggcccggttgtggcgccggctctgcgcgggccagacgccacaccgggcctggctc
tatgccgactgccggcgccggctgatggcgccgccgcccatcctgccggagcggctgcac
ctcttcggcatgagcagtctggcgccagtctattggcaactctttcagcaactgggcagg
cacatggcggtgcactgcttccagctcagtccctgccgcggcttctggcacgacctcaag
ccgaaatggcggcaggcgcgggagcaggaggcagacgccctgctggccatgaaggccctg
cccaaagagcccaacgcgctcctggtgcagttcgggcaggcgggccgggaatttgcctgc
cagattctggaaggcgggccggacaatccggtggaactgtacggggaaccggaaggcgac
acgctgctggccagagtgcaaagtcatctgctcaacatgcaggcgatgccgcagcggccg
gaagagcgggagttcatggatgaaaacgacctttcactgcagtttcacgactgctcttcg
gagctgcgcgaggtgcaggtgctgcacgactatcttctggactgttgccaacgcgatcca
gagctgacacccggcgacatactggtggctgcaccggacatcggccgctatgcggcagcg
gtgcaggcggttttcggcgaagccccgccggagcgcttcatgccctttgccctggccgac
cagcccctcgcggcggccatccgcctgccccgggtgtttctggaactcattgcctgcctg
cagagccgctgcaccagcacggagctgctggcgctcctggaggagccggccctgcaccgg
cgtttcggactcgaggccggccatctgcccacagcctgcaaactcctgcggcaggccggc
atctgctggggtctggacgccgaacaccgccttgacctcgattgcggcccggcgtccggg
gaggcccacagcttccgccacgggctggaccggctgctgctgggctttgccatgggcgag
gccgacgcgctgcacgccggtctctaccccagcgtgccggcaggcgacgaggccatggtc
gtgctccaggccctcctggccctccacgacaggctggcggcatggcggaagatctggcaa
cggcagcgaccggccgcggaatggccacccttgctcctcagaatgcaggaggatttcttc
gccccggccggcggggcggaaggcgtgcagcggctgcgcgaggccattcacgagctgtca
gaggagctggccctttcgggctattcggccccgcttgctccaaaaagcctgacacttcgc
ctcgaagagagcctgaacgccatggacaatggccaggcctttctttccggccgcgtcacc
ttctgcaacatggtgcccatgcgctccctgccctttcagatcatctgcctgctcggcatg
aacgacggcatgttcccgcggcagcagcgcccggtgggttttgacgaaatggcgaagcat
ccccggctgggcgaccgcaaacgccgggaagacgacctctatctctttctggaggccatg
ctgtcggccaggaaggccctgtatctgtcgtggcttggccacagccagcaggacggcacc
gaacggcccccttctctggccctcagcgcgctcgccgattatctggatgcagcctttcaa
atcaaaggccagccggaaaaacggccgagccaggcccagagcgttcagcaccccttccag
cccttcagcccgaaaaactatggccgcgctctggaaggctgcggcctggcctggcctgcc
agcttcgatccggcctggctgccggccacagggcccggagcagccccggcctttctggac
ggccccctgccgctggaagcgccggtcggggccatcgagctgtccgcactcctgcgcttc
tggcgtcatccggccgcctattttctgcagtacaggctgggcatggccctgcaccgggaa
gaggatatgccggccgaggccgagcccttcacgctggacggcctggacaactacctgctg
cgcgaagctgtcgtggagcggcttctggccggacaggacgaagcccatatcggtgcggtg
ctgcgcgcgcagggttgcctgccggaagggcagttcgccgccctggccctgcgcggcccg
gcggaggaaggtgccagcctggccaaagccctgctgccgctgctggccgaaccggcagaa
ccgcaggaactgcagcttactgtggagggataccaggtgtccggcagggtggacagactc
taccgtgccggtcgggtgctctggaccgccgggcaggccacgagcggccggctgaccgat
gtctggctctgccatctggcgctggccgccagcggcaggccgtgcagcagcaccctggtg
tttcggaacaaggacactgccgtgcaaatctggacatggccggagctggcgcaggacgag
gcggcagcgcttctggccccgtggctgcgcggctatgcggaaggccaggaaacggcgctg
ccctttttcccgaaaagttccctggcctgggccgaaagcatgcagaaaacagacgacgag
ggcattgccctgagcagggccgggcagcgctggcagggcagccacaccggggccgaacgg
gacgaagcggtctttgccctgctcttctccggaaaaaacccctttgacgataccttcatc
cgcctggccgggctgctacagtccctgctggccaggaaagcggaggcagccaatgcaggc
gcttga
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