Desulfobulbus oralis: CAY53_01945
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Entry
CAY53_01945 CDS
T05339
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
deo
Desulfobulbus oralis
Pathway
deo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAY53_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_01945
Enzymes [BR:
deo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CAY53_01945
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAY53_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
ResIII
ETF
Motif
Other DBs
NCBI-ProteinID:
AVD70396
UniProt:
A0A2L1GL84
LinkDB
All DBs
Position
476970..480491
Genome browser
AA seq
1173 aa
AA seq
DB search
MQALDPLRLPLAGRLLLEASAGTGKTWTLSLLVLRLVVERSLEIDHILVLTYTRAATAEL
KSRIRARLRQAQRFWQSGQDAAAAGLDAETAQVLNQILAQGPPGAGRRLDAAVSRMDEAA
ITTIHGFCQKVLQEQAFEAGLPFDQDLLVDESGLREEIMADFWRSRFYPLGPEESAMVAS
WWDGPQALLRELERSLAVADADIRPQLAPDARERSLTAVRESHASVAAKWQKQGGEVRAF
LAGNKALSRDRTLYRQDNVARLVADMEALAANNDFPRLLPERLKLLDAGFMHRHLRKNHD
PDWQAPPFCKDFAVFWQAYQELMHTWRLGWLLAARHDLKDGLARKKQEQRRFGYDDLLIR
VEQALRQPALAAALGERFPAVLVDEFQDTDPVQYRIFTAIGSTPEHQLFCMIGDPKQAIY
SFRGGDIFTYLRAKQDTEKSVAGACRTMNTNYRSAPGAIALVNTLFGRNERPFGFSGMDF
YPVEPAGRAQDADLQVQGTAFLPLNLLLLPNAGQKALTKTEAAVAAAQRCAALIRRLLAP
GGVCIKNRPLASGDIAVLVQSHRQAEQMKAALMAEGLASVYALKQSVFTSPEAEELSTLL
AALMDPADRALAVAAFATSLFGSTARELYAARQQSALADEGARKLHEYRIRWQQYGVGPM
LYRLFAQEKLSARLGSPAKGERRLTNFLHLAELLHEAECAAPGMERLLRWLGRERQEAGN
SESRDERLMRLESDEHLVRISTWHSAKGLEYPIVFLPFLWDARGRTRADATLSALFHDRK
TLRASLSFHATSAEQDLAQEEEDSEQMRLLYVALTRAIYCTFACWGRISDMEQTAMARLL
HQDRKPDDDSALMTDCNRLNATEAGQLVRCIRPEEALLAEGAGANEISAEAAPLAARPFT
GVIGLGYLNCSYSGMVAGLDALAAGDRDEVPLPETSPGPEAQDFIHIDTFPRGPQAGSCL
HSLLEQLDFTRPAAAQAEVLGQVLERFGVDPRWAGALPGWLDGVLATHLPDSRMLAGLPP
QDSWRELKFWFPVQAYPRLCTVLGLPHMGGRHAQGLMTGAMDLVFRHEGRFYIVDYKSNH
LGGQTAYTAAAMQASMTQHQYQVQYRIYTLALHRLLRSRLAGYAYERDFGGVYYLFVRGM
RPGSGQGIFHVRPEIGDIARLDALCGEAGHERR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcttgatccccttcgtctgcccctcgccggccgcttgctcctggaggccagc
gccggcacgggcaaaacatggacgctgagtctgctggttctgcgcctggtcgtggagcgg
tctctggagattgaccacattctggtgctcacctacacccgcgccgccaccgccgaactg
aagagccgcatccgtgcccggctgcggcaggcgcagcgtttctggcaaagcgggcaggac
gccgcggcagcgggtctggatgcggaaacggcgcaggtcctgaaccagatcctggcccag
ggccccccaggagccggccggcgcctcgacgcggcggtcagccgcatggacgaggcggcc
atcaccaccattcacggcttttgccagaaggtgctgcaggagcaggcctttgaagccggc
ctgccctttgatcaggatctgctggtcgatgaaagcggcctgcgtgaagagatcatggcc
gatttctggcgcagccgattttacccgctggggcccgaggaaagcgccatggtggcctcg
tggtgggacgggccgcaggcgctgctgcgggagcttgagcgctcactggccgtggcggat
gccgacattcggccgcagctcgccccggatgcgcgggagcgaagcctgacagccgtgcgg
gagagccacgcctctgtcgccgcgaaatggcaaaaacagggcggcgaggtacgtgcgttt
ctggcgggcaacaaggcattgagccgcgacaggacgctctaccgccaggacaatgtggca
cggcttgtggccgacatggaggcgctggccgcaaacaacgactttccccgcctgctgccg
gaacggctgaaactgctggatgccgggttcatgcaccgccatctgcgcaaaaaccatgat
ccggactggcaggcccctcccttttgcaaggactttgcggtcttctggcaggcctatcag
gaactgatgcacacatggcggctgggctggctccttgcggcccggcatgacctgaaagac
gggctggcccgcaaaaaacaggaacagcgccgctttggctacgacgacctgctgatccgg
gtggagcaagccctgcgccagccggccctggccgcagccctgggcgagcgctttcccgcg
gtactggtggatgaatttcaggacaccgacccggtgcagtaccgcatctttacagccatc
ggcagcactccggagcaccagctcttctgcatgatcggcgatcccaagcaggccatctat
tccttccgcggcggcgacatcttcacctatctccgggccaaacaggacaccgaaaaaagc
gtggcaggcgcctgccgcaccatgaacaccaattaccgctccgcacccggcgcgattgcc
ctggtcaatacccttttcggccggaacgagaggccctttggcttctccggcatggacttt
tatccggtagagccggcaggcagggcgcaggatgccgacctgcaggtgcagggtacggcg
tttctgccgctgaaccttttactcctgcccaatgcgggacagaaagcactcaccaagacg
gaggctgccgtggccgcggcgcagcgctgtgcagcgctcatccggcggcttctggcaccg
ggcggggtatgcatcaaaaaccggccgctcgccagcggagacatcgcggtactggtgcag
agccaccggcaggcagagcagatgaaggccgccctcatggcagagggactggccagcgtc
tacgccttgaagcagtcggtattcacaagccctgaggctgaagaactatcgaccctgctt
gcagccctcatggatccggccgaccgggccctggctgtggcagcctttgccaccagcctc
ttcggcagcacagccagggagctgtatgccgcccgccaacagagcgccctggccgacgag
ggggcccgcaagctgcacgaataccggattcgctggcagcagtacggcgtaggccccatg
ctgtaccggctctttgcccaggaaaaactgagcgcccgactgggttctcctgcaaagggc
gaacgccggctcaccaattttctgcatctggccgaactgctgcacgaggcggaatgcgcc
gcacccggcatggaacgactgctgcgctggcttggccgggaacgacaggaggcagggaac
agcgaaagccgggacgaacggctcatgcggctggaaagcgacgagcatctggtccgcatc
agcacctggcacagcgccaagggcctggaatatccgattgtctttctgccctttctgtgg
gacgccagaggcagaacacgggctgacgcgaccctaagcgccctgttccacgaccgcaag
accctgcgtgccagtctgagttttcatgccacttcagccgaacaggacctggcacaggag
gaagaggactccgagcagatgcggcttctgtatgtggccctgacccgtgccatctactgc
acctttgcctgctggggccggatttcggacatggaacagacagccatggcccggctttta
caccaagacaggaagcccgacgacgacagcgccctgatgacggactgcaacaggctgaac
gctacggaggcggggcaactcgtgcgctgcatccggccggaggaggcgctgctggccgaa
ggggcaggggccaacgagatcagcgccgaagcggccccgcttgccgcccgcccctttacc
ggcgtaatcggcctgggctacctcaactgcagctattcgggcatggtggccggcctggac
gcgctggccgcgggtgacagggacgaagtgccgctgcccgagacgagtccgggcccggag
gcccaggattttatccatatcgacacattcccgcgtgggccccaggccggctcctgcctg
cacagtctgttggaacagctcgatttcacccgccctgccgcggcgcaggccgaagtgctg
ggccaggtgctggagcgcttcggcgttgacccgcgctgggccggggccctgcccggctgg
ctggacggggttctggccacccatctgcctgacagccggatgctggccggcctgccccca
caggacagttggcgggaactgaagttctggttcccggtgcaggcctacccacgcctttgc
acggtcctcggtctgccgcacatgggcgggcgccatgcgcagggcctgatgaccggcgcc
atggatctggtctttcgccacgaggggcgtttttacattgtagactacaagtccaatcac
ctgggcgggcagaccgcctacacggccgcggccatgcaggccagtatgacgcagcaccag
tatcaggtgcagtaccggatctacacgctcgccctgcaccgcctgctgcgctcgcggctt
gcgggctacgcctacgagcgcgacttcggcggagtgtactacctctttgtgcgcgggatg
cggcccggcagcggacagggcattttccatgtccggccagagatcggggacatcgcgcgg
ctggacgcgctctgcggggaggctggccatgagcggcgttga
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