Desulfobulbus oralis: CAY53_01950
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Entry
CAY53_01950 CDS
T05339
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
deo
Desulfobulbus oralis
Pathway
deo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAY53_01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_01950
Enzymes [BR:
deo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CAY53_01950
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAY53_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
AAA_22
PIF1
UvrD_C
Helicase_RecD
UvrD-helicase
SH3_13
DEAD
SLFN-g3_helicase
nSTAND3
AAA_5
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AVD72190
UniProt:
A0A2L1GRB0
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All DBs
Position
480418..482328
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AA seq
636 aa
AA seq
DB search
MSGQRSGTSRGWTRSAGRLAMSGVETRIAHWRRQGWLNEVDGHLARMLARRHPAMGVGAA
LAAALLSQALEEGHTCLPLAQIAATLTARGEATSVQGLQDQLWASAAVVAPEHAAERPAP
MVLDAAQRLALLRWHRAESRIAAELVRRAGALTEVDEERAQQMLARLFPESPDAPNLQKT
AAALALCKRLLILCGGPGTGKTWTLARMLALCSALTAGQLRVALAAPTGRAAMRLGEAIR
EAAAAMSEDIGRQALPEAETLHRLLGYQPQTGRFRRNADNPLPADLVIVDEASMVDDLLL
DALLAAAPAGCRLVLCGDPGQLPPVAPGSLLHSLAGLGTPGYAPALRAACARLCGRDMPE
PPDAAAANLLNECRITLKKAHRFDETSGISALAAALQHADPAAELKRVLSRSWPDITLLG
TETARSGLPAILLEMFRPLYRAVTAAEAMAAFARCRVLCALREGPWGVAGINRLCRELLR
RQGLVPARQEWYRGLPVLIQHNAHDLRLYNGDTGMLWPDENAVLRAWFAAEGGLRPFPPA
ALPAWQPAWAITVHKAQGAEFDDVVLVLPEGDNPLLTRELLYTAVTRARKRLVLVAGPEA
LERSAVRQLQRYSALGDLLSAFGKPPIFIDSTSPNE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccagagatcggggacatcgcgcggctggacgcgctctgcggggaggctggcc
atgagcggcgttgaaacccggattgcacattggcgccggcagggctggctgaacgaggtg
gatggtcatctggccaggatgctggcccggcggcatccggcgatgggtgtcggggcggcg
ctggctgcggcgctgctcagtcaggctctggaagagggccacacctgcctgccgctggcg
cagattgcagcaacgctcacagcccggggcgaggcgacttcggtccagggcctgcaagac
cagctttgggccagcgctgcggtggtggctccggaacatgcggcagagcgtccggcccca
atggtgctggatgcagcccagcgtttggcgcttttgcgctggcaccgggcggaaagccgc
attgccgcagagctggtccggcgggccggggccttgacagaggtggacgaggagcgggcg
caacagatgctggcgcgcctttttcccgaaagtccggatgcgccaaacctgcaaaaaacc
gcagccgccctggcgctgtgcaagcggctgctcatcctgtgcggcggcccgggcacaggc
aaaacctggaccctggcccgcatgctggccctgtgctcggcgctgacagcggggcagctc
agggtggcgctggccgcacccactggccgggcagccatgcgcttgggcgaggccattcgc
gaggccgcagccgccatgtcggaggacatcggccggcaggccctgcctgaagcggaaacc
ctgcaccggctcctgggctatcaaccgcaaacgggacgcttccgcagaaacgcggacaac
ccgctgccagccgatctggtgattgtggacgaagcctccatggtggacgatctcctgctg
gatgccctgctggccgcagcgcccgcaggctgccggctggtgctctgcggcgatccgggg
caactgccgccggttgcccccgggtcgctgctgcacagtctggccggcttgggcacgccc
gggtatgcaccggccttgcgggcggcctgcgcacggctctgcggccgggatatgccggaa
ccccctgatgctgcggccgcaaacctgctgaatgaatgtcggatcacgctgaaaaaagcg
caccgctttgatgaaacaagcggcatttccgctctggctgccgccctgcaacacgcagat
cctgcagcagaactgaagcgggttctgagccggagctggccggatattacgctgcttggg
accgaaacggcgcgctccgggctgccggcgattctcctggagatgttcaggcccctgtac
cgcgcggttacggccgcagaggcgatggccgcctttgcccgttgccgcgtgctttgtgcg
cttcgggaaggcccctggggcgtcgcggggatcaaccgcctttgccgggaactgctgcgc
aggcagggcctcgttccggcccggcaggaatggtaccggggtctgcccgtgctcattcag
cacaatgcgcacgacctgcgtctctacaacggcgataccggtatgctctggccggatgaa
aacgctgtactcagggcctggttcgccgcagaagggggcctgcgtcccttcccgccggcc
gccctgcccgcctggcagccggcctgggccatcaccgtgcacaaggcccagggagcggaa
ttcgacgatgtggtgctggtcctgccggaaggcgacaacccgctcctgacccgggagctg
ctctacaccgccgtgacccgggccagaaaaagactggtactggtggccgggccggaggcg
ctggaacgcagcgccgtccgccagttgcagcgttacagcgcacttggcgatttgctttcg
gcttttggcaagcccccaatttttattgacagtacttcaccgaacgagtag
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